RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ZSCAN32Q9NX65 697 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 TAS2R13Q9NYV9 303 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 SH3BP4Q9P0V3 963 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 A0A096LPK6 155 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 E5RJQ4 531 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 RAG1P15918 1043 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 KCNT2Q6UVM3 1135 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 RIPOR1Q6ZS17 1223 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 GLT6D1Q7Z4J2 308 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 SOCS4Q8WXH5 440 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 CDCA5Q96FF9 252 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 MAGEB10Q96LZ2 347 aaPredicted RBP13.09□□□□□ -0.31
SCN8A-209ENST00000627620 MRPL9Q9BYD2 267 aaKnown RBP13.09□□□□□ -0.31
SCN8A-209ENST00000627620 POPDC2Q9HBU9 364 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 PTPRHQ9HD43 1115 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 NINJ2Q9NZG7 142 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 SLIT1O75093 1534 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 CES2O00748 559 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 TRIM13O60858 407 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 SMNDC1O75940 238 aaKnown RBP eCLIP13.09□□□□□ -0.31
SCN8A-209ENST00000627620 ZCCHC18P0CG32 403 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 APOPT1Q96IL0 206 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 APBA2Q99767 749 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 MID1IP1Q9NPA3 183 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 AHSPQ9NZD4 102 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 HACD1B0YJ81 288 aa13.08□□□□□ -0.31
SCN8A-209ENST00000627620 FCGR1AP12314 374 aa13.08□□□□□ -0.31
SCN8A-209ENST00000627620 BDNFP23560 247 aa13.08□□□□□ -0.31
SCN8A-209ENST00000627620 GUCA1AP43080 201 aaPredicted RBP13.08□□□□□ -0.31
SCN8A-209ENST00000627620 SGCGQ13326 291 aa13.08□□□□□ -0.31
SCN8A-209ENST00000627620 WDR59Q6PJI9 974 aa13.08□□□□□ -0.31
SCN8A-209ENST00000627620 TMC3Q7Z5M5 1100 aa13.08□□□□□ -0.31
SCN8A-209ENST00000627620 NECAB2Q7Z6G3 386 aa13.08□□□□□ -0.31
SCN8A-209ENST00000627620 TKTL2Q9H0I9 626 aa13.08□□□□□ -0.31
SCN8A-209ENST00000627620 TMEM39AQ9NV64 488 aa13.08□□□□□ -0.31
SCN8A-209ENST00000627620 FZD1Q9UP38 647 aa13.08□□□□□ -0.31
SCN8A-209ENST00000627620 H3BQF6 201 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 HMGCRP04035 888 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 TBCELQ5QJ74 424 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 GPC2Q8N158 579 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 GLMNQ92990 594 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 THG1LQ9NWX6 298 aaKnown RBP13.08□□□□□ -0.32
SCN8A-209ENST00000627620 COMMD8Q9NX08 183 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 FAM153AQ9UHL3 310 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 PDZK1P1A8MUH7 402 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 IGSF6O95976 241 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 LGALS2P05162 132 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 ABCB1P08183 1280 aaPredicted RBP13.08□□□□□ -0.32
SCN8A-209ENST00000627620 CYP3A4P08684 503 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 MAD2L1Q13257 205 aaPredicted RBP13.08□□□□□ -0.32
SCN8A-209ENST00000627620 RD3Q7Z3Z2 195 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 KCNK18Q7Z418 384 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 TLR10Q9BXR5 811 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 TISP43B9A030 160 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 SOX6P35712 828 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 FIG4Q92562 907 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 VTI1BQ9UEU0 232 aa13.08□□□□□ -0.32
SCN8A-209ENST00000627620 LTFP02788 710 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 OR56A5P0C7T3 313 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 ACAP1Q15027 740 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 ADRM1Q16186 407 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 CEP78Q5JTW2 689 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 FNDC5Q8NAU1 212 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 THAP1Q9NVV9 213 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 UMODL1Q5DID0 1318 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 FKBP6O75344 327 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 IQSEC1Q6DN90 963 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 VN1R5Q7Z5H4 357 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 SEMA4DQ92854 862 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 MTERF3Q96E29 417 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 VMP1Q96GC9 406 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 FAM163AQ96GL9 167 aaPredicted RBP13.07□□□□□ -0.32
SCN8A-209ENST00000627620 PDGFDQ9GZP0 370 aaPredicted RBP13.07□□□□□ -0.32
SCN8A-209ENST00000627620 ANKRD6Q9Y2G4 727 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 TDRKHQ9Y2W6 561 aaKnown RBP13.07□□□□□ -0.32
SCN8A-209ENST00000627620 A0A1B0GW55 424 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 RECQL4O94761 1208 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 DUX4L2P0CJ85 424 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 DUX4L3P0CJ86 424 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 DUX4L4P0CJ87 422 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 DUX4L5P0CJ88 424 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 DUX4L6P0CJ89 424 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 DUX4L7P0CJ90 424 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 PPP2R1BP30154 601 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 MLH1P40692 756 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 TUFMP49411 452 aaKnown RBP13.07□□□□□ -0.32
SCN8A-209ENST00000627620 BEX3Q00994 111 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 ACOX1Q15067 660 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 SEPHS2Q99611 448 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 ULBP1Q9BZM6 244 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 ZCCHC2Q9C0B9 1178 aaKnown RBP13.07□□□□□ -0.32
SCN8A-209ENST00000627620 PORCNQ9H237 461 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 DUX4Q9UBX2 424 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 SAC3D1A6NKF1 404 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 APOC4-APOC2K7ER74 178 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 APOC2P02655 101 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 AMHP03971 560 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 RAD23AP54725 363 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 CRYMQ14894 314 aa13.07□□□□□ -0.32
SCN8A-209ENST00000627620 PKN2Q16513 984 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms