RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 OR6C75A6NL08 312 aa22.71■■□□□ 1.23
PNKP-220ENST00000627232 LRRC14Q15048 493 aa22.71■■□□□ 1.23
PNKP-220ENST00000627232 SCN4BQ8IWT1 228 aa22.71■■□□□ 1.23
PNKP-220ENST00000627232 DENND1AQ8TEH3 1009 aa22.71■■□□□ 1.23
PNKP-220ENST00000627232 MZB1Q8WU39 189 aa22.71■■□□□ 1.23
PNKP-220ENST00000627232 HDAC11Q96DB2 347 aa22.71■■□□□ 1.23
PNKP-220ENST00000627232 CFAP36Q96G28 342 aa22.71■■□□□ 1.23
PNKP-220ENST00000627232 MAGEB18Q96M61 343 aa22.71■■□□□ 1.23
PNKP-220ENST00000627232 EBNA1BP2Q99848 306 aaKnown RBP22.71■■□□□ 1.23
PNKP-220ENST00000627232 ABI2Q9NYB9 513 aaPredicted RBP22.71■■□□□ 1.23
PNKP-220ENST00000627232 SCML2Q9UQR0 700 aa22.71■■□□□ 1.23
PNKP-220ENST00000627232 LRIG2O94898 1065 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 PRKCHP24723 683 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 GALNT2Q10471 571 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 KBTBD12Q3ZCT8 623 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 ZNF280DQ6N043 979 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 C6orf89Q6UWU4 347 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 YTHDF3Q7Z739 585 aaKnown RBP22.7■■□□□ 1.22
PNKP-220ENST00000627232 PIGWQ7Z7B1 504 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 SCD5Q86SK9 330 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 ZNF567Q8N184 647 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 NUP93Q8N1F7 819 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 ARHGAP18Q8N392 663 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 ALKBH8Q96BT7 664 aaKnown RBP22.7■■□□□ 1.22
PNKP-220ENST00000627232 MRRFQ96E11 262 aaKnown RBP22.7■■□□□ 1.22
PNKP-220ENST00000627232 UNC93B1Q9H1C4 597 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 FBXO44Q9H4M3 255 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 LRFN2Q9ULH4 789 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 TRIM17Q9Y577 477 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 IKBKGQ9Y6K9 419 aa22.7■■□□□ 1.22
PNKP-220ENST00000627232 APOEP02649 317 aa22.69■■□□□ 1.22
PNKP-220ENST00000627232 C1QAP02745 245 aa22.69■■□□□ 1.22
PNKP-220ENST00000627232 VIMP08670 466 aaKnown RBP22.69■■□□□ 1.22
PNKP-220ENST00000627232 IL9RQ01113 521 aa22.69■■□□□ 1.22
PNKP-220ENST00000627232 ZNF33AQ06730 810 aa22.69■■□□□ 1.22
PNKP-220ENST00000627232 IFRD2Q12894 506 aaPredicted RBP22.69■■□□□ 1.22
PNKP-220ENST00000627232 PPP2R5DQ14738 602 aa22.69■■□□□ 1.22
PNKP-220ENST00000627232 CTXN3Q4LDR2 81 aa22.69■■□□□ 1.22
PNKP-220ENST00000627232 FAM182AQ5T1J6 154 aa22.69■■□□□ 1.22
PNKP-220ENST00000627232 LRRC8BQ6P9F7 803 aa22.69■■□□□ 1.22
PNKP-220ENST00000627232 CYS1Q717R9 158 aa22.69■■□□□ 1.22
PNKP-220ENST00000627232 MON1AQ86VX9 555 aa22.69■■□□□ 1.22
PNKP-220ENST00000627232 TMEM175Q9BSA9 504 aa22.69■■□□□ 1.22
PNKP-220ENST00000627232 ZNF180Q9UJW8 692 aa22.69■■□□□ 1.22
PNKP-220ENST00000627232 TTC3P53804 2025 aa22.69■■□□□ 1.22
PNKP-220ENST00000627232 A0A1W2PPM1 405 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 TYROBPO43914 113 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 ALDH2P05091 517 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 INHBAP08476 426 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 FGFR3P22607 806 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 EPHB2P29323 1055 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 CCR1P32246 355 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 GBP2P32456 591 aaPredicted RBP22.68■■□□□ 1.22
PNKP-220ENST00000627232 COG7P83436 770 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 ELAVL2Q12926 359 aaKnown RBP22.68■■□□□ 1.22
PNKP-220ENST00000627232 MSANTD2Q6P1R3 559 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 TAX1BP1Q86VP1 789 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 CCNJLQ8IV13 435 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 NPWQ8N729 165 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 SH3TC2Q8TF17 1288 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 VAT1Q99536 393 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 MRPL9Q9BYD2 267 aaKnown RBP22.68■■□□□ 1.22
PNKP-220ENST00000627232 PAK6Q9NQU5 681 aaPredicted RBP22.68■■□□□ 1.22
PNKP-220ENST00000627232 IL37Q9NZH6 218 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 SEPT10Q9P0V9 454 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 PCDHA11Q9Y5I1 949 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 NR2E3Q9Y5X4 410 aa22.68■■□□□ 1.22
PNKP-220ENST00000627232 SPAG7O75391 227 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 ZWINTO95229 277 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 ASMTLO95671 621 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 PTPN3P26045 913 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 HOXC13P31276 330 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 GARSP41250 739 aaKnown RBP22.67■■□□□ 1.22
PNKP-220ENST00000627232 WDR4P57081 412 aaKnown RBP22.67■■□□□ 1.22
PNKP-220ENST00000627232 CORO7P57737 925 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 SPARCL1Q14515 664 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 FAM171A1Q5VUB5 890 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 STEAP4Q687X5 459 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 UNC5AQ6ZN44 842 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 SLC26A11Q86WA9 606 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 NPAS4Q8IUM7 802 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 CRIPAKQ8N1N5 446 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 CCDC197Q8NCU1 140 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 GSDMBQ8TAX9 411 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 GDAP1Q8TB36 358 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 OXCT2Q9BYC2 517 aaPredicted RBP22.67■■□□□ 1.22
PNKP-220ENST00000627232 PLAC1Q9HBJ0 212 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 MARCH5Q9NX47 278 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 SAMD15Q9P1V8 674 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 TRHDEQ9UKU6 1024 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 SNX10Q9Y5X0 201 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 A0A1W2PQH9 124 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 FAM155BO75949 473 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 KIAA0754O94854 1291 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 PARNO95453 639 aaKnown RBP22.67■■□□□ 1.22
PNKP-220ENST00000627232 PSMB4P28070 264 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 NRG1Q02297 640 aaPredicted RBP22.67■■□□□ 1.22
PNKP-220ENST00000627232 SMARCB1Q12824 385 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 MANEALQ5VSG8 457 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 PID1Q7Z2X4 250 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms