RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 TMC7Q7Z402 723 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 AMIGO2Q86SJ2 522 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 RNF135Q8IUD6 432 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 RDM1Q8NG50 284 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 AZIN2Q96A70 460 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 LENG1Q96BZ8 264 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-216ENST00000620854 DGCR14Q96DF8 476 aaKnown RBP7.15□□□□□ -1.27
NEDD9-216ENST00000620854 HSPBAP1Q96EW2 488 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 C7orf26Q96N11 449 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 AGAP3Q96P47 875 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 FAM193BQ96PV7 902 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-216ENST00000620854 TSPYL2Q9H2G4 693 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-216ENST00000620854 ST6GALNAC4Q9H4F1 302 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 SUDS3Q9H7L9 328 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-216ENST00000620854 PXMP2Q9NR77 195 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 RGS17Q9UGC6 210 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-216ENST00000620854 WDR27A2RRH5 827 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 HMX2A2RU54 273 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 E7ESA3 106 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 GOLGA8TH3BQL2 631 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 TFAP2AP05549 437 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 GJB1P08034 283 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 RPL10P27635 214 aaKnown RBP7.14□□□□□ -1.27
NEDD9-216ENST00000620854 OLIG2Q13516 323 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 EMC2Q15006 297 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 CCDC142Q17RM4 750 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 ANKRD20A4Q4UJ75 823 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 TRIM67Q6ZTA4 783 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 CAND1Q86VP6 1230 aaKnown RBP7.14□□□□□ -1.27
NEDD9-216ENST00000620854 ABI1Q8IZP0 508 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 SIX6OS1Q8N1H7 587 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 GRIN3AQ8TCU5 1115 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 TFB1MQ8WVM0 346 aaKnown RBP7.14□□□□□ -1.27
NEDD9-216ENST00000620854 CCDC138Q96M89 665 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 LENG8Q96PV6 779 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-216ENST00000620854 PEBP4Q96S96 227 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 ANKEF1Q9NU02 776 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 RNF19AQ9NV58 838 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 GTSE1Q9NYZ3 720 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 ADA2Q9NZK5 511 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 BTBD7Q9P203 1132 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 PSAT1Q9Y617 370 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 BTAF1O14981 1849 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 SLC15A5A6NIM6 579 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 GNGT2O14610 69 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 TPP1O14773 563 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 METTL18O95568 372 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 ERBB2P04626 1255 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 SDC4P31431 198 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 SOX11P35716 441 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 FDFT1P37268 417 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 CCR10P46092 362 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 ZNF280AP59817 542 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-216ENST00000620854 ACTR2P61160 394 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 PPIL2Q13356 520 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 TMTC4Q5T4D3 741 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 LRRC38Q5VT99 294 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 MOB2Q70IA6 237 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 PLEKHH3Q7Z736 793 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 SPNS2Q8IVW8 549 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 SDCCAG3Q96C92 435 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 TMA16Q96EY4 203 aaKnown RBP7.14□□□□□ -1.27
NEDD9-216ENST00000620854 DCUN1D1Q96GG9 259 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 SIRPGQ9P1W8 387 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 HMGXB4Q9UGU5 601 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 BAG5Q9UL15 447 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 ADAMTSL1Q8N6G6 1762 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 FZD9O00144 591 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 ADCY6O43306 1168 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 USP12O75317 370 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 SUPT3HO75486 399 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 ERVK-10P10266 1014 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 EPHA3P29320 983 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 ARRB2P32121 409 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 MLH1P40692 756 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 ADARP55265 1226 aaKnown RBP7.14□□□□□ -1.27
NEDD9-216ENST00000620854 SNRPFP62306 86 aaKnown RBP7.14□□□□□ -1.27
NEDD9-216ENST00000620854 PRPSAP1Q14558 356 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 MYLK3Q32MK0 819 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 KCTD21Q4G0X4 260 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 PABPC1LQ4VXU2 614 aaKnown RBP7.14□□□□□ -1.27
NEDD9-216ENST00000620854 KDELC2Q7Z4H8 507 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 LRRC71Q8N4P6 559 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 METTL25Q8N6Q8 603 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 SNX31Q8N9S9 440 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 RNF149Q8NC42 400 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 TMIGD2Q96BF3 282 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 HAPLN3Q96S86 360 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 NTPCRQ9BSD7 190 aaKnown RBP7.14□□□□□ -1.27
NEDD9-216ENST00000620854 EFHD1Q9BUP0 239 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 CAAP1Q9H8G2 361 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 HSFX1Q9UBD0 423 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 CPA4Q9UI42 421 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 PHF24Q9UPV7 400 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 AP4B1Q9Y6B7 739 aa7.14□□□□□ -1.27
NEDD9-216ENST00000620854 MANSC4A6NHS7 340 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-216ENST00000620854 VILLO15195 856 aa7.13□□□□□ -1.27
NEDD9-216ENST00000620854 ATP9BO43861 1147 aa7.13□□□□□ -1.27
NEDD9-216ENST00000620854 ITGAXP20702 1163 aa7.13□□□□□ -1.27
NEDD9-216ENST00000620854 IDH3AP50213 366 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms