RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 CRYZL1O95825 349 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 CHRM5P08912 532 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-214ENST00000620676 PPP4R3CPQ6ZMV5 832 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 EXD1Q8NHP7 514 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 RMDN3Q96TC7 470 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 FARSBQ9NSD9 589 aaKnown RBP5.15□□□□□ -1.59
VPS13D-214ENST00000620676 TOR4AQ9NXH8 423 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 NKIRAS2Q9NYR9 191 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 GIT1Q9Y2X7 761 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 RPTORQ8N122 1335 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 TPP1O14773 563 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 EDF1O60869 148 aaKnown RBP5.15□□□□□ -1.59
VPS13D-214ENST00000620676 CYP11B1P15538 503 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 GRM4Q14833 912 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 PPP1R3AQ16821 1122 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 OSCARQ8IYS5 282 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 GAD1Q99259 594 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 TMEM245Q9H330 911 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 WDR55Q9H6Y2 383 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-214ENST00000620676 GPAMQ9HCL2 828 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 BFARQ9NZS9 450 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 N6AMT1Q9Y5N5 214 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF608Q9ULD9 1512 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-214ENST00000620676 ARHGEF10O15013 1369 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 TCP10L2B9ZVM9 353 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 PDE8BO95263 885 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 GLRA2P23416 452 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 ACTR2P61160 394 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 SMARCB1Q12824 385 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 Q3C1V9 767 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 FRMD7Q6ZUT3 714 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 DTX3Q8N9I9 347 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 TM9SF1O15321 606 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 RPS7P62081 194 aaKnown RBP5.15□□□□□ -1.59
VPS13D-214ENST00000620676 YWHAEP62258 255 aaKnown RBP5.15□□□□□ -1.59
VPS13D-214ENST00000620676 DEFA5Q01523 94 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 FASTKQ14296 549 aaKnown RBP5.15□□□□□ -1.59
VPS13D-214ENST00000620676 UBAP2Q5T6F2 1119 aaKnown RBP5.15□□□□□ -1.59
VPS13D-214ENST00000620676 HIPK1Q86Z02 1210 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 DNAJB14Q8TBM8 379 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 TLCD1Q96CP7 247 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 ZHX1-C8orf76Q96EF9 292 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 TIPINQ9BVW5 301 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 TEKT3Q9BXF9 490 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 SIK2Q9H0K1 926 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 FAM205AQ6ZU69 1335 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 A0A0B4J269 797 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 MLLT3P42568 568 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 NFYCQ13952 458 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 KRT72Q14CN4 511 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 QPRTQ15274 297 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 AOC3Q16853 763 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 NIPAL1Q6NVV3 410 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 STX19Q8N4C7 294 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 ZFP28Q8NHY6 868 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 FEZF2Q8TBJ5 459 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SERAC1Q96JX3 654 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 FEM1AQ9BSK4 669 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 TUT1Q9H6E5 874 aaKnown RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 UBA6A0AVT1 1052 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SH3D21A4FU49 640 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 I3L521 148 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 NOBOXO60393 691 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 ANKDD1AQ495B1 522 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 ABCG8Q9H221 673 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 A8MUA0 341 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SLC16A1P53985 500 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 STK11Q15831 433 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 MTERF2Q49AM1 385 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 C5orf22Q49AR2 442 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 C11orf88Q6PI97 169 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 MFSD7Q6UXD7 560 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SEC14L1Q92503 715 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SMARCAD1Q9H4L7 1026 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 PCDHGA7Q9Y5G6 932 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 METTL21EPA6NDL7 271 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 H0YGN5 161 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 MRASO14807 208 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 TSPAN3O60637 253 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 XPAP23025 273 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 IL18R1Q13478 541 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 EEPD1Q7L9B9 569 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 PCYOX1LQ8NBM8 494 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 VPS33AQ96AX1 596 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 CD274Q9NZQ7 290 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 NFS1Q9Y697 457 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 ATP10DQ9P241 1426 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 CYP27B1O15528 508 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 DNAJA2O60884 412 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 AMHP03971 560 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SERPINE1P05121 402 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 CNPP09543 421 aaKnown RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 NLRX1Q86UT6 975 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 CLHC1Q8NHS4 586 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SMIM30A4D0T7 59 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 KBTBD13C9JR72 458 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 SLC16A3O15427 465 aaKnown RBP5.14□□□□□ -1.59
VPS13D-214ENST00000620676 PDGFRAP16234 1089 aa5.14□□□□□ -1.59
VPS13D-214ENST00000620676 CCNIQ14094 377 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms