RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-223	ENST00000620632	DEC1	Q9P2X7	70 aa		11.18	□□□□□ -0.62
TARDBP-223	ENST00000620632	MYO1A	Q9UBC5	1043 aa		11.18	□□□□□ -0.62
TARDBP-223	ENST00000620632	CKAP5	Q14008	2032 aa		11.18	□□□□□ -0.62
TARDBP-223	ENST00000620632	MUC6	Q6W4X9	2439 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	F9	P00740	461 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	CYBB	P04839	570 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	APOD	P05090	189 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	TPM1	P09493	284 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	SLC2A3	P11169	496 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	COL9A1	P20849	921 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	HLA-F	P30511	346 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	GRIA2	P42262	883 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	DGKG	P49619	791 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	ZNF143	P52747	638 aa	Predicted RBP	11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	GALC	P54803	685 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	SATB1	Q01826	763 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	AUH	Q13825	339 aa	Known RBP	11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	SLC18A3	Q16572	532 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	FSCB	Q5H9T9	825 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	CCDC122	Q5T0U0	273 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	PPP1R2P3	Q6NXS1	205 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	FBXL22	Q6P050	247 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	TSSK4	Q6SA08	328 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	STRADA	Q7RTN6	431 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	C1orf210	Q8IVY1	113 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	CCDC185	Q8N715	623 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	RPLP0P6	Q8NHW5	317 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	USP33	Q8TEY7	942 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	LMLN	Q96KR4	655 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	PRMT8	Q9NR22	394 aa	Predicted RBP	11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	PARVA	Q9NVD7	372 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	VANGL2	Q9ULK5	521 aa		11.17	□□□□□ -0.62
TARDBP-223	ENST00000620632	TBC1D3B	A6NDS4	549 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	TMEM191C	A6NGB0	347 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632		F5H5T6	163 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	CYP1A2	P05177	515 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	MYBL1	P10243	752 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	TDGF1	P13385	188 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	CD70	P32970	193 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	TIE1	P35590	1138 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	MAGEA9	P43362	315 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	ANGPT1	Q15389	498 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	C5orf22	Q49AR2	442 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	FBXO43	Q4G163	708 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	C2orf27A	Q580R0	203 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	C10orf76	Q5T2E6	689 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	MPP7	Q5T2T1	576 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	DAB2IP	Q5VWQ8	1189 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	EGFLAM	Q63HQ2	1017 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	DCUN1D2	Q6PH85	259 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	VPS36	Q86VN1	386 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	SYNPO	Q8N3V7	929 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	HJURP	Q8NCD3	748 aa	Predicted RBP	11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	OR52K2	Q8NGK3	314 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	BTBD6	Q96KE9	485 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	PEBP4	Q96S96	227 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	ACOX2	Q99424	681 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	ANP32E	Q9BTT0	268 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	SIK2	Q9H0K1	926 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	NEU3	Q9UQ49	428 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	SLC27A6	Q9Y2P4	619 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	CACNA1H	O95180	2353 aa		11.16	□□□□□ -0.62
TARDBP-223	ENST00000620632	NUP205	Q92621	2012 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	CHURC1-FNTB	B4DL54	471 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	FAM72C	H0Y354	149 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632		H0Y858	1186 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632		K7ESF4	209 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	ADAM23	O75077	832 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	CNTN5	O94779	1100 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	LUC7L3	O95232	432 aa	Known RBP	11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	TCF4	P15884	667 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	FECH	P22830	423 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	PSMA2	P25787	234 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	CDC25B	P30305	580 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	ADRA1B	P35368	520 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	TNFRSF4	P43489	277 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	NUMB	P49757	651 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	DMWD	Q09019	674 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	LMAN2	Q12907	356 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	FUT11	Q495W5	492 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	ALF	Q53S48	1182 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	FAM72A	Q5TYM5	149 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	FAM72D	Q6L9T8	149 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	CXorf57	Q6NSI4	855 aa	Known RBP	11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	MAMSTR	Q6ZN01	415 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	ADIPOR2	Q86V24	386 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	FAM72B	Q86X60	149 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	CPNE8	Q86YQ8	564 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	MFN1	Q8IWA4	741 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	CCAR2	Q8N163	923 aa	Known RBP	11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	CARNMT1	Q8N4J0	409 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	SPEM1	Q8N4L4	309 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	CCDC33	Q8N5R6	958 aa		11.15	□□□□□ -0.62

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