RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 VAV3Q9UKW4 847 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 ITGA11Q9UKX5 1188 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 ZNF646O15015 1829 aaPredicted RBP10.65□□□□□ -0.7
VPS11-207ENST00000620429 A0A1W2PPW3 197 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 TMX2-CTNND1H3BSU7 103 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 GIPC1O14908 333 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 AREL1O15033 823 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 DYNC1LI2O43237 492 aaPredicted RBP10.65□□□□□ -0.7
VPS11-207ENST00000620429 CHMP2AO43633 222 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 MTA2O94776 668 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 ETV4P43268 484 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 ZNF132P52740 706 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 CETN1Q12798 172 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 NFE2Q16621 373 aaPredicted RBP10.65□□□□□ -0.7
VPS11-207ENST00000620429 RALGPS1Q5JS13 557 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 CEP78Q5JTW2 689 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 ODR4Q5SWX8 454 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 ZFP1Q6P2D0 407 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 C1orf186Q6ZWK4 172 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 CARM1Q86X55 608 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 ZNF354CQ86Y25 554 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 FBXW8Q8N3Y1 598 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 LILRB1Q8NHL6 650 aaPredicted RBP10.65□□□□□ -0.7
VPS11-207ENST00000620429 TRIB2Q92519 343 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 KAT5Q92993 513 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 RMND5BQ96G75 393 aaPredicted RBP10.65□□□□□ -0.7
VPS11-207ENST00000620429 WRNIP1Q96S55 665 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 YME1L1Q96TA2 773 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 AIFM2Q9BRQ8 373 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 C1orf50Q9BV19 199 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 HERC2P3Q9BVR0 1158 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 VPS33BQ9H267 617 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 RMND5AQ9H871 391 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 OLAHQ9NV23 265 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 THG1LQ9NWX6 298 aaKnown RBP10.65□□□□□ -0.7
VPS11-207ENST00000620429 SLC17A7Q9P2U7 560 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 PTBP2Q9UKA9 531 aaKnown RBP10.65□□□□□ -0.7
VPS11-207ENST00000620429 STRIP2Q9ULQ0 834 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 COL4A5P29400 1685 aa10.65□□□□□ -0.71
VPS11-207ENST00000620429 A0A087WXM4 84 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 A8MU76 341 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 NUAK1O60285 661 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 JRKO75564 520 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 NR4A1P22736 598 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 BASP1P80723 227 aaKnown RBP10.64□□□□□ -0.71
VPS11-207ENST00000620429 PPP2R2BQ00005 443 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 NIPAL4Q0D2K0 466 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 MTMR2Q13614 643 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 ZYXQ15942 572 aaKnown RBP10.64□□□□□ -0.71
VPS11-207ENST00000620429 TBC1D10BQ4KMP7 808 aaPredicted RBP10.64□□□□□ -0.71
VPS11-207ENST00000620429 EFHC2Q5JST6 749 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 AARS2Q5JTZ9 985 aaKnown RBP10.64□□□□□ -0.71
VPS11-207ENST00000620429 PPM1LQ5SGD2 360 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 COL13A1Q5TAT6 717 aaPredicted RBP10.64□□□□□ -0.71
VPS11-207ENST00000620429 PDPRQ8NCN5 879 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 RMDN1Q96DB5 314 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 FRMD8Q9BZ67 464 aaPredicted RBP10.64□□□□□ -0.71
VPS11-207ENST00000620429 SMARCAD1Q9H4L7 1026 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 PCIF1Q9H4Z3 704 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.64□□□□□ -0.71
VPS11-207ENST00000620429 TMEM9Q9P0T7 183 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 CNTN3Q9P232 1028 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 KCNN3Q9UGI6 736 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 GPSM3Q9Y4H4 160 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 ZNF839A8K0R7 811 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 E5RJQ4 531 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 FAM189A1O60320 539 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 GCATO75600 419 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 SORBS2O94875 1100 aaKnown RBP10.64□□□□□ -0.71
VPS11-207ENST00000620429 GZMAP12544 262 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 POLR2BP30876 1174 aaKnown RBP10.64□□□□□ -0.71
VPS11-207ENST00000620429 GCLMP48507 274 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 GALNT1Q10472 559 aaPredicted RBP10.64□□□□□ -0.71
VPS11-207ENST00000620429 FGD3Q5JSP0 725 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 TAS2R42Q7RTR8 314 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 HAUS6Q7Z4H7 955 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 SPARTQ8N0X7 666 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 HIPK4Q8NE63 616 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 BRSK1Q8TDC3 778 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 EPS8L1Q8TE68 723 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 MZB1Q8WU39 189 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 TP53INP1Q96A56 240 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 TRAF6Q9Y4K3 522 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 PCDHGA8Q9Y5G5 932 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 NFASCO94856 1347 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 SPDYE2BA6NHP3 402 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 B8ZZF3 427 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 ACOX3O15254 700 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 HOXC11O43248 304 aaPredicted RBP10.64□□□□□ -0.71
VPS11-207ENST00000620429 SPDYE6P0CI01 402 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 BMP3P12645 472 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 POLR2CP19387 275 aaPredicted RBP10.64□□□□□ -0.71
VPS11-207ENST00000620429 BGNP21810 368 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 IL4RP24394 825 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 COPAP53621 1224 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 PPP3CAQ08209 521 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 KIAA1841Q6NSI8 718 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 FBXO11Q86XK2 927 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 GRIN3AQ8TCU5 1115 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 RASSF5Q8WWW0 418 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms