RNA–Protein interactions for RNA: ENST00000620292.4

CBWD1-229, Transcript of COBW domain containing 1, human

TSL 5

Gene CBWD1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-229	ENST00000620292	FAM209B	Q5JX69	171 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	KIAA1614	Q5VZ46	1190 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	IZUMO3	Q5VZ72	239 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	IL31	Q6EBC2	164 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	MRNIP	Q6NTE8	343 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	NAPRT	Q6XQN6	538 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	SRRM1	Q8IYB3	904 aa	Known RBP	4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	CCDC33	Q8N5R6	958 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	METTL25	Q8N6Q8	603 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	SVIP	Q8NHG7	77 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	VOPP1	Q96AW1	172 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	RIPOR3	Q96MK2	946 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	WDR24	Q96S15	920 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	SEMA4C	Q9C0C4	833 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	CIPC	Q9C0C6	399 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	SLC25A32	Q9H2D1	315 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	SNX15	Q9NRS6	342 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	RXFP3	Q9NSD7	469 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	GJB4	Q9NTQ9	266 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	ASIC5	Q9NY37	505 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	SLC27A6	Q9Y2P4	619 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	SLX4	Q8IY92	1834 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	TRPM7	Q96QT4	1865 aa		4.36	□□□□□ -1.71
CBWD1-229	ENST00000620292	ARFGEF2	Q9Y6D5	1785 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	SCN4A	P35499	1836 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	GLTPD2	A6NH11	291 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	MANSC4	A6NHS7	340 aa	Predicted RBP	4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	POC1B-GALNT4	F8VUJ3	575 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292		H3BNC9	293 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	CES2	O00748	559 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	NCK2	O43639	380 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	CBFA2T3	O75081	653 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	CHRM5	P08912	532 aa	Predicted RBP	4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	AR	P10275	920 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	VEGFA	P15692	232 aa	Predicted RBP	4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	EGR1	P18146	543 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	MST1	P26927	711 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	ATIC	P31939	592 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	AMPH	P49418	695 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	CTCF	P49711	727 aa	Predicted RBP	4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	TMF1	P82094	1093 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	MTAP	Q13126	283 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	LONRF1	Q17RB8	773 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	SLC35G1	Q2M3R5	365 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	MAP9	Q49MG5	647 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	DGKK	Q5KSL6	1271 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	PRAMEF17	Q5VTA0	474 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	ABLIM2	Q6H8Q1	611 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	CRTC1	Q6UUV9	634 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	GALNT4	Q8N4A0	578 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	PNPLA1	Q8N8W4	532 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	KAZALD1	Q96I82	304 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	RITA1	Q96K30	269 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	SNX27	Q96L92	541 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	MYD88	Q99836	296 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	TMEM8A	Q9HCN3	771 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	MGAT4C	Q9UBM8	478 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	PCDH11X	Q9BZA7	1347 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	PCDH11Y	Q9BZA8	1340 aa		4.35	□□□□□ -1.71
CBWD1-229	ENST00000620292	PRRT4	C9JH25	899 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	HNRNPDL	O14979	420 aa	Known RBP	4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	COQ9	O75208	318 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	WDR47	O94967	919 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	MT-CO3	P00414	261 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	APEH	P13798	732 aa	Known RBP	4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	IDE	P14735	1019 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	ZNF37A	P17032	561 aa	Predicted RBP	4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	ATF7	P17544	494 aa	Predicted RBP	4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	ADRA1D	P25100	572 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	NTSR1	P30989	418 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	RGS19	P49795	217 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	NEK3	P51956	506 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	EIF4A1	P60842	406 aa	Known RBP	4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	CFHR3	Q02985	330 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	PMS2P11	Q13670	270 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	SLC5A9	Q2M3M2	681 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	FAXC	Q5TGI0	409 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	CLEC9A	Q6UXN8	241 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	SKAP1	Q86WV1	359 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	CCDC28A	Q8IWP9	274 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	CCDC150	Q8NCX0	1101 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	DEPTOR	Q8TB45	409 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	ZNF398	Q8TD17	642 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	ADAMTS18	Q8TE60	1221 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	GJA10	Q969M2	543 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	LRRC46	Q96FV0	321 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	SGCZ	Q96LD1	299 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	CCDC138	Q96M89	665 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	FYTTD1	Q96QD9	318 aa	Known RBP	4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	MMS19	Q96T76	1030 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	NECTIN3	Q9NQS3	549 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	ADARB2	Q9NS39	739 aa	Known RBP	4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	TM7SF3	Q9NS93	570 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	RGL1	Q9NZL6	768 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	TMOD4	Q9NZQ9	345 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	SEMA5B	Q9P283	1151 aa		4.34	□□□□□ -1.71
CBWD1-229	ENST00000620292	MAN2B2	Q9Y2E5	1009 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms