RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 HPS4Q9NQG7 708 aa16.33■□□□□ 0.2
MALAT1-213ENST00000618227 XPO7Q9UIA9 1087 aaKnown RBP16.33■□□□□ 0.2
MALAT1-213ENST00000618227 DUSP12Q9UNI6 340 aa16.33■□□□□ 0.2
MALAT1-213ENST00000618227 PCDHA3Q9Y5H8 950 aa16.33■□□□□ 0.2
MALAT1-213ENST00000618227 CAPN6Q9Y6Q1 641 aa16.33■□□□□ 0.2
MALAT1-213ENST00000618227 TYW5A2RUC4 315 aaKnown RBP16.32■□□□□ 0.2
MALAT1-213ENST00000618227 TCF4P15884 667 aa16.32■□□□□ 0.2
MALAT1-213ENST00000618227 SLC6A4P31645 630 aa16.32■□□□□ 0.2
MALAT1-213ENST00000618227 EIF2DP41214 584 aaKnown RBP16.32■□□□□ 0.2
MALAT1-213ENST00000618227 SSR1P43307 286 aaKnown RBP16.32■□□□□ 0.2
MALAT1-213ENST00000618227 ARSEP51690 589 aa16.32■□□□□ 0.2
MALAT1-213ENST00000618227 LY6G5CQ5SRR4 150 aa16.32■□□□□ 0.2
MALAT1-213ENST00000618227 ARTNQ5T4W7 220 aa16.32■□□□□ 0.2
MALAT1-213ENST00000618227 RAP1GAP2Q684P5 730 aa16.32■□□□□ 0.2
MALAT1-213ENST00000618227 FBXL22Q6P050 247 aa16.32■□□□□ 0.2
MALAT1-213ENST00000618227 CHST9Q7L1S5 443 aa16.32■□□□□ 0.2
MALAT1-213ENST00000618227 RNF135Q8IUD6 432 aa16.32■□□□□ 0.2
MALAT1-213ENST00000618227 KATNAL2Q8IYT4 538 aa16.32■□□□□ 0.2
MALAT1-213ENST00000618227 EXOC4Q96A65 974 aa16.32■□□□□ 0.2
MALAT1-213ENST00000618227 SIK2Q9H0K1 926 aa16.32■□□□□ 0.2
MALAT1-213ENST00000618227 C8orf33Q9H7E9 229 aaPredicted RBP16.32■□□□□ 0.2
MALAT1-213ENST00000618227 TRMT1Q9NXH9 659 aaKnown RBP16.32■□□□□ 0.2
MALAT1-213ENST00000618227 KIF26AQ9ULI4 1882 aaPredicted RBP16.31■□□□□ 0.2
MALAT1-213ENST00000618227 WASH4PA8MWX3 477 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 E9PAM4 449 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 FGF10O15520 208 aaPredicted RBP16.31■□□□□ 0.2
MALAT1-213ENST00000618227 CLDN11O75508 207 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 CYP17A1P05093 508 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 ASGR2P07307 311 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 OXCT1P55809 520 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 PREPLQ4J6C6 727 aaPredicted RBP16.31■□□□□ 0.2
MALAT1-213ENST00000618227 FYB2Q5VWT5 728 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 TXNRD3NBQ6F5E7 133 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 TMEM25Q86YD3 366 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 RCOR2Q8IZ40 523 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 LGI2Q8N0V4 545 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 UBL4BQ8N7F7 174 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 TTC16Q8NEE8 873 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 EXD1Q8NHP7 514 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 CSGALNACT1Q8TDX6 532 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 HES6Q96HZ4 224 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 EBF3Q9H4W6 596 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 DHX35Q9H5Z1 703 aaKnown RBP16.31■□□□□ 0.2
MALAT1-213ENST00000618227 ZWILCHQ9H900 591 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 FBXO10Q9UK96 956 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 JRKLQ9Y4A0 524 aa16.31■□□□□ 0.2
MALAT1-213ENST00000618227 GOLGA6L7A0A1B0GV03 622 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 A0A1B0GVM2 712 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 TCAF2A6NFQ2 919 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 H3BRJ5 948 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 CACNG3O60359 315 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 LRIG2O94898 1065 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 ZRANB2O95218 330 aaKnown RBP eCLIP16.3■□□□□ 0.2not detected■□□□□ 10.8
MALAT1-213ENST00000618227 ADH5P11766 374 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 ARSAP15289 507 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 RHOQP17081 205 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 ARL4AP40617 200 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 PEX5P50542 639 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 CDH4P55283 916 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 COPS2P61201 443 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 MEI1Q5TIA1 1274 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 DAB2IPQ5VWQ8 1189 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 RFWD3Q6PCD5 774 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 C14orf80Q86SX3 495 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 CPNE8Q86YQ8 564 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 SUGP1Q8IWZ8 645 aaKnown RBP16.3■□□□□ 0.2
MALAT1-213ENST00000618227 KCTD6Q8NC69 237 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 TSC1Q92574 1164 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 FAF2Q96CS3 445 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 TBC1D31Q96DN5 1066 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 ZFYVE19Q96K21 471 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 RPRD1AQ96P16 312 aaPredicted RBP16.3■□□□□ 0.2
MALAT1-213ENST00000618227 ZNF670Q9BS34 389 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 BBS2Q9BXC9 721 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 ZYG11BQ9C0D3 744 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 GOLPH3Q9H4A6 298 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 CATSPERBQ9H7T0 1116 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 PCDH18Q9HCL0 1135 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 TMPRSS4Q9NRS4 437 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.3■□□□□ 0.2
MALAT1-213ENST00000618227 STIM2Q9P246 746 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 WNT16Q9UBV4 365 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 VANGL2Q9ULK5 521 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 EFR3BQ9Y2G0 817 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 XIRP2A4UGR9 3374 aa16.3■□□□□ 0.2
MALAT1-213ENST00000618227 EYSQ5T1H1 3165 aa16.29■□□□□ 0.2
MALAT1-213ENST00000618227 PRUNE2Q8WUY3 3088 aa16.29■□□□□ 0.2
MALAT1-213ENST00000618227 USP27XA6NNY8 438 aa16.29■□□□□ 0.2
MALAT1-213ENST00000618227 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.29■□□□□ 0.2
MALAT1-213ENST00000618227 FAM72CH0Y354 149 aa16.29■□□□□ 0.2
MALAT1-213ENST00000618227 TUBB4AP04350 444 aa16.29■□□□□ 0.2
MALAT1-213ENST00000618227 KDELR1P24390 212 aa16.29■□□□□ 0.2
MALAT1-213ENST00000618227 RWDD2BP57060 319 aa16.29■□□□□ 0.2
MALAT1-213ENST00000618227 TAZQ16635 292 aa16.29■□□□□ 0.2
MALAT1-213ENST00000618227 CA9Q16790 459 aa16.29■□□□□ 0.2
MALAT1-213ENST00000618227 KCNT1Q5JUK3 1230 aa16.29■□□□□ 0.2
MALAT1-213ENST00000618227 FAM72AQ5TYM5 149 aa16.29■□□□□ 0.2
MALAT1-213ENST00000618227 TRIM68Q6AZZ1 485 aa16.29■□□□□ 0.2
MALAT1-213ENST00000618227 FAM72DQ6L9T8 149 aa16.29■□□□□ 0.2
MALAT1-213ENST00000618227 ZNF783Q6ZMS7 281 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms