RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 GTPBP3Q969Y2 492 aaKnown RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 TCRBV21S2A2A0A5A6 115 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 RARAP10276 462 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 PSMC3P17980 439 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 PBLDP30039 288 aaPredicted RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 CDC25AP30304 524 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 CBX5P45973 191 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 NLRP12P59046 1061 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 STX4Q12846 297 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 PAGE2BQ5JRK9 111 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 RSPO2Q6UXX9 243 aaPredicted RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 CEACAM20Q6UY09 585 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 CCDC81Q6ZN84 652 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 AHI1Q8N157 1196 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 UBE2E3Q969T4 207 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 C18orf25Q96B23 403 aaPredicted RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 QRFPRQ96P65 431 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 PNKPQ96T60 521 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 BBS2Q9BXC9 721 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 E7EWF7 191 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 SGK1O00141 431 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 DHX15O43143 795 aaKnown RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 RNASEH2AO75792 299 aaKnown RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 KCNA10Q16322 511 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 SGCBQ16585 318 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 FAM102AQ5T9C2 384 aaPredicted RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 CHDHQ8NE62 594 aaPredicted RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 CYP2W1Q8TAV3 490 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 TBCKQ8TEA7 893 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 STARD8Q92502 1023 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 GLS2Q9UI32 602 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ARL2BPQ9Y2Y0 163 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 KLRC4-KLRK1H3BQV0 150 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 VWA5AO00534 786 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ARHGEF9O43307 516 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 RAD51CO43502 376 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 CYB5AP00167 134 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 SOAT1P35610 550 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ZNF423Q2M1K9 1284 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ATG16L1Q676U5 607 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 C4orf22Q6V702 233 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 TBC1D1Q86TI0 1168 aaPredicted RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 SIDT2Q8NBJ9 832 aaKnown RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 FAM3CQ92520 227 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 BHMTQ93088 406 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 SERPINI1Q99574 410 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 MXRA8Q9BRK3 442 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 LDOC1O95751 146 aaPredicted RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 BEND3Q5T5X7 828 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ARHGAP11AQ6P4F7 1023 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 P3H2Q8IVL5 708 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ADSSL1Q8N142 457 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 PDCL2Q8N4E4 241 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ISCA1Q9BUE6 129 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 BRD8Q9H0E9 1235 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 RAB9BQ9NP90 201 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 TIGARQ9NQ88 270 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ANKEF1Q9NU02 776 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 A0A087X0T9 212 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 TEX33O43247 280 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 MCF2P10911 925 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ATP5A1P25705 553 aaKnown RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 CD40LGP29965 261 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 NUP107P57740 925 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 KCNC3Q14003 757 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 C8orf34Q49A92 452 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 CDC42EP5Q6NZY7 148 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 RUFY3Q7L099 469 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 EFL1Q7Z2Z2 1120 aaKnown RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 LENG9Q96B70 501 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 NKIRAS1Q9NYS0 192 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 DUSP12Q9UNI6 340 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 PRR36Q9H6K5 1346 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 MKRN2OSH3BPM6 223 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 AXIN1O15169 862 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 SRGAP2O75044 1071 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 CIB2O75838 187 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 DYNLL1P63167 89 aaKnown RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 ZNF252P-AS1Q0IIN9 211 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 DDX39BQ13838 428 aaKnown RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 NR0B2Q15466 257 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ST3GAL2Q16842 350 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ZRANB3Q5FWF4 1079 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ZNF513Q8N8E2 541 aaPredicted RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 DIS3LQ8TF46 1054 aaKnown RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 PDGFCQ9NRA1 345 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ZNF112Q9UJU3 913 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ENTPD4Q9Y227 616 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ADH5P11766 374 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 FOLR3P41439 243 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 BCAR1P56945 870 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 YWHAZP63104 245 aaKnown RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 BEX3Q00994 111 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 RTL10Q7L3V2 364 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 MYO1HQ8N1T3 1032 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ARFGAP2Q8N6H7 521 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ANKS4BQ8N8V4 417 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ZNF653Q96CK0 615 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 SIPA1Q96FS4 1042 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ELMO2Q96JJ3 720 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms