RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FAM92AA1XBS5 289 aa18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 A8MXQ7 604 aa18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 NPC1O15118 1278 aa18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 PAPSS1O43252 624 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 BRINP1O60477 761 aa18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 NR2F2P24468 414 aa18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 PRKCHP24723 683 aa18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 CTSKP43235 329 aa18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 CDH8P55286 799 aa18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 ORC1Q13415 861 aa18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 ZCWPW2Q504Y3 356 aa18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 ZNF397Q8NF99 534 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 TMEM176AQ96HP8 235 aa18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 SEMA4CQ9C0C4 833 aa18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 KCTD10Q9H3F6 313 aa18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.41■□□□□ 0.54
TRAPPC3-209ENST00000616395 ZNF233A6NK53 670 aa18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 AKR1B15C9JRZ8 316 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 KIAA0391O15091 583 aaKnown RBP18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 CCP110O43303 1012 aa18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 LDOC1O95751 146 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 CST3P01034 146 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 DLATP10515 647 aaKnown RBP18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 CASP4P49662 377 aa18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 MFAP3P55082 362 aa18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 CYP24A1Q07973 514 aa18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 ZNF234Q14588 700 aa18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 FAM35AQ86V20 835 aa18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 LRRC8AQ8IWT6 810 aa18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 XXYLT1Q8NBI6 393 aa18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 CCDC127Q96BQ5 260 aa18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 BIRC7Q96CA5 298 aa18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 CNDP2Q96KP4 475 aaKnown RBP18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 ARID3AQ99856 593 aa18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 DMAP1Q9NPF5 467 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC3-209ENST00000616395 A0A1B0GTQ1 180 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 B8ZZF3 427 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 NR3C1P04150 777 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 C1SP09871 688 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 FAM163BP0C2L3 166 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 CDK4P11802 303 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 PSMC2P35998 433 aaKnown RBP18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 ACADVLP49748 655 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 MARSP56192 900 aaKnown RBP18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 GOLGA8FQ08AF8 430 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 GOLGA8DPQ0D2H9 430 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 KCNH2Q12809 1159 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 VWA3BQ502W6 1294 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 PRAMEF14Q5SWL7 426 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 FBXL19Q6PCT2 694 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 PAQR9Q6ZVX9 377 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 TRAPPC11Q7Z392 1133 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 ADAT2Q7Z6V5 191 aaKnown RBP18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 PLEKHO2Q8TD55 490 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 UCMAQ8WVF2 138 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 SORCS1Q8WY21 1168 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 MED10Q9BTT4 135 aa18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 ARMCX3Q9UH62 379 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 COL5A1P20908 1838 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC3-209ENST00000616395 ATP8B3O60423 1300 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 DFNA5O60443 496 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 EXOC3O60645 756 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 FSBPO95073 299 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 EPHX1P07099 455 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 CD27P26842 260 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 ACTN2P35609 894 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 ATP5C1P36542 298 aaKnown RBP18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 TNNC1P63316 161 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 WDR72Q3MJ13 1102 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 Q6ZNB5 142 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 ERICH1Q86X53 443 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 IRF2BP1Q8IU81 584 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 C12orf56Q8IXR9 622 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 ZC3H3Q8IXZ2 948 aaKnown RBP18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 WBP1Q96G27 269 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 NAA15Q9BXJ9 866 aaKnown RBP18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 NDST4Q9H3R1 872 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 COMMD8Q9NX08 183 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 CABIN1Q9Y6J0 2220 aa18.38■□□□□ 0.53
TRAPPC3-209ENST00000616395 TSPAN3O60637 253 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 SEMA4FO95754 770 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 PENKP01210 267 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 KRT13P13646 458 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 RHDQ02161 417 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 SURF1Q15526 300 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 TBC1D25Q3MII6 688 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 FYB2Q5VWT5 728 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 APTXQ7Z2E3 356 aaKnown RBP18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 WDR49Q8IV35 697 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 OR2T3Q8NH03 318 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 CGRRF1Q99675 332 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 LHX5Q9H2C1 402 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 KIAA1586Q9HCI6 787 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 CYLDQ9NQC7 956 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 TLR8Q9NR97 1041 aaKnown RBP18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 ZNHIT6Q9NWK9 470 aaKnown RBP18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 OSER1Q9NX31 292 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 ELOVL2Q9NXB9 296 aa18.37■□□□□ 0.53
TRAPPC3-209ENST00000616395 KNL1Q8NG31 2342 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms