RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 ZNF662Q6ZS27 426 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 MAGEE2Q8TD90 523 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-211ENST00000615798 RHBDF1Q96CC6 855 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 TREM1Q9NP99 234 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 DHRS7Q9Y394 339 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 ASNSP08243 561 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 STYK1Q6J9G0 422 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 LRRC47Q8N1G4 583 aaKnown RBP9.47□□□□□ -0.89
COL12A1-211ENST00000615798 HPS4Q9NQG7 708 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 PIK3CGP48736 1102 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 CNSTQ6PJW8 725 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 ZNF605Q86T29 641 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 ZNF34Q8IZ26 560 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 SH2D3CQ8N5H7 860 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 NMRK1Q9NWW6 199 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 FAM153BP0C7A2 387 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 GRIK1P39086 918 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 GSTM5P46439 218 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 ZNF677Q86XU0 584 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 IFNL1Q8IU54 200 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 RMND5AQ9H871 391 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 NEK6Q9HC98 313 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 SPATA7Q9P0W8 599 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 USP12O75317 370 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 DLG2Q15700 870 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 SWT1Q5T5J6 900 aaKnown RBP9.47□□□□□ -0.89
COL12A1-211ENST00000615798 CACHD1Q5VU97 1274 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 DHRSXQ8N5I4 330 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 TRIM62Q9BVG3 475 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 RIBC2Q9H4K1 309 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 GFOD1Q9NXC2 390 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 RPS6KA6Q9UK32 745 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 SIK3Q9Y2K2 1263 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 SALL1Q9NSC2 1324 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 WRBO00258 174 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 YES1P07947 543 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 EIF2AK2P19525 551 aaKnown RBP9.47□□□□□ -0.89
COL12A1-211ENST00000615798 CDKL1Q00532 357 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 PITRM1Q5JRX3 1037 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 XRRA1Q6P2D8 792 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 LNX2Q8N448 690 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 KYQ8NBH2 561 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 MAGEC3Q8TD91 643 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 PNPLA3Q9NST1 481 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 MINPP1Q9UNW1 487 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 SPEF2Q9C093 1822 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 LRRN2O75325 713 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 PNPP00491 289 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 TDGQ13569 410 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 MEMO1Q9Y316 297 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 ANXA6P08133 673 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 SOAT1P35610 550 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 CCNHP51946 323 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-211ENST00000615798 COASYQ13057 564 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 SKIV2LQ15477 1246 aaKnown RBP9.46□□□□□ -0.89
COL12A1-211ENST00000615798 CXXC5Q7LFL8 322 aaKnown RBP9.46□□□□□ -0.89
COL12A1-211ENST00000615798 TAMM41Q96BW9 452 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 FRMD8P1Q9BZ68 369 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-211ENST00000615798 SARS2Q9NP81 518 aaKnown RBP9.46□□□□□ -0.89
COL12A1-211ENST00000615798 NDFIP2Q9NV92 336 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 STK32BQ9NY57 414 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 HEY2Q9UBP5 337 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 OGDHLQ9ULD0 1010 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 GRIP1Q9Y3R0 1128 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 ARHGAP23Q9P227 1491 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 MSH4O15457 936 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 LDLRP01130 860 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 RALAP11233 206 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 MYL9P24844 172 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 SDC2P34741 201 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 MATKP42679 507 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 SPIDRQ14159 915 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 CHI3L2Q15782 390 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 CLEC16AQ2KHT3 1053 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 SLC27A3Q5K4L6 730 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 LARGE2Q8N3Y3 721 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 HTRA1Q92743 480 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 Q96MT0 163 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 PPP1R2P1Q96PQ5 205 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 UBQLN1Q9UMX0 589 aaKnown RBP9.46□□□□□ -0.89
COL12A1-211ENST00000615798 C14orf166Q9Y224 244 aaKnown RBP9.46□□□□□ -0.89
COL12A1-211ENST00000615798 ANXA5P08758 320 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 POU1F1P28069 291 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 RORAP35398 523 aa9.46□□□□□ -0.89
COL12A1-211ENST00000615798 ZNF655Q8N720 491 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-211ENST00000615798 C1orf196B1AJZ1 125 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 PRKAB2O43741 272 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 CD40LGP29965 261 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 AFF1P51825 1210 aaKnown RBP9.46□□□□□ -0.9
COL12A1-211ENST00000615798 GNG2P59768 71 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 ZNF425Q6IV72 752 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 METTL23Q86XA0 190 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 GPD1LQ8N335 351 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 POC1BQ8TC44 478 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 UTP15Q8TED0 518 aaKnown RBP9.46□□□□□ -0.9
COL12A1-211ENST00000615798 RNF139Q8WU17 664 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 COPS4Q9BT78 406 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 DGCR6LQ9BY27 220 aa9.46□□□□□ -0.9
COL12A1-211ENST00000615798 GGA3Q9NZ52 723 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms