RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 LONP2Q86WA8 852 aa17.32■□□□□ 0.36
CBWD3-211ENST00000615061 CIR1Q86X95 450 aaPredicted RBP17.32■□□□□ 0.36
CBWD3-211ENST00000615061 CHPFQ8IZ52 775 aa17.32■□□□□ 0.36
CBWD3-211ENST00000615061 HJURPQ8NCD3 748 aaPredicted RBP17.32■□□□□ 0.36
CBWD3-211ENST00000615061 RXFP2Q8WXD0 754 aa17.32■□□□□ 0.36
CBWD3-211ENST00000615061 NKD2Q969F2 451 aaPredicted RBP17.32■□□□□ 0.36
CBWD3-211ENST00000615061 DDX50Q9BQ39 737 aaKnown RBP17.32■□□□□ 0.36
CBWD3-211ENST00000615061 NUP58Q9BVL2 599 aa17.32■□□□□ 0.36
CBWD3-211ENST00000615061 SLC2A11Q9BYW1 496 aa17.32■□□□□ 0.36
CBWD3-211ENST00000615061 CACNA2D2Q9NY47 1150 aa17.32■□□□□ 0.36
CBWD3-211ENST00000615061 RRN3Q9NYV6 651 aa17.32■□□□□ 0.36
CBWD3-211ENST00000615061 SPTBN4Q9H254 2564 aa17.32■□□□□ 0.36
CBWD3-211ENST00000615061 A0A1W2PQJ5 194 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 PRR23AA6NEV1 266 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 DDX3XO00571 662 aaKnown RBP eCLIP17.31■□□□□ 0.36
CBWD3-211ENST00000615061 HRO43593 1189 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 PAGE1O75459 146 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 CALB1P05937 261 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 SLC2A3P11169 496 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 HOXA6P31267 233 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 CD70P32970 193 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 RFC1P35251 1148 aaPredicted RBP17.31■□□□□ 0.36
CBWD3-211ENST00000615061 CXCR3P49682 368 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 CDO1Q16878 200 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 CCDC14Q49A88 953 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 MPP7Q5T2T1 576 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 HGSNATQ68CP4 663 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 ANO7Q6IWH7 933 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 BNIPLQ7Z465 357 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 MFN1Q8IWA4 741 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 CARNMT1Q8N4J0 409 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 CAMKK1Q8N5S9 505 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 TSTD1Q8NFU3 115 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 PGAP3Q96FM1 320 aaPredicted RBP17.31■□□□□ 0.36
CBWD3-211ENST00000615061 CIPCQ9C0C6 399 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 TKTL2Q9H0I9 626 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 WDCPQ9H6R7 721 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 SLC12A6Q9UHW9 1150 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 SNX10Q9Y5X0 201 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 HS3ST4Q9Y661 456 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 DOCK4Q8N1I0 1966 aa17.31■□□□□ 0.36
CBWD3-211ENST00000615061 TCRBV5S1A1TA0A578 114 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 C2CD4BA6NLJ0 364 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 APBB3O95704 486 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 KRT3P12035 628 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 PDGFRAP16234 1089 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 RRM1P23921 792 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 CASP14P31944 242 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 NUMBP49757 651 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 IRAK1P51617 712 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 GSCP56915 257 aaPredicted RBP17.3■□□□□ 0.36
CBWD3-211ENST00000615061 C1QBPQ07021 282 aaKnown RBP17.3■□□□□ 0.36
CBWD3-211ENST00000615061 FSCBQ5H9T9 825 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 FBXL22Q6P050 247 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 ARCQ7LC44 396 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 C14orf80Q86SX3 495 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 FAM131BQ86XD5 332 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 MCOLN2Q8IZK6 566 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 C3orf20Q8ND61 904 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 MDGA1Q8NFP4 955 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 KCNV2Q8TDN2 545 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 TPSD1Q9BZJ3 242 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 SIK2Q9H0K1 926 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 ELOVL2Q9NXB9 296 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 ARHGEF38Q9NXL2 777 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 GGA2Q9UJY4 613 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 VANGL2Q9ULK5 521 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 CAPN11Q9UMQ6 739 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 RAD54BQ9Y620 910 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 CKAP5Q14008 2032 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 F5H5T6 163 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 AP5Z1O43299 807 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 PLEKP08567 350 aaPredicted RBP17.3■□□□□ 0.36
CBWD3-211ENST00000615061 NTSR1P30989 418 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 AUHQ13825 339 aaKnown RBP17.3■□□□□ 0.36
CBWD3-211ENST00000615061 LPAL2Q16609 132 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 HSF5Q4G112 596 aaPredicted RBP17.3■□□□□ 0.36
CBWD3-211ENST00000615061 EOGTQ5NDL2 527 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 WDR59Q6PJI9 974 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 CHST9Q7L1S5 443 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 ADIPOR2Q86V24 386 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 WDR5BQ86VZ2 330 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 SUMF1Q8NBK3 374 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 IGSF8Q969P0 613 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 SELENOOQ9BVL4 669 aa17.3■□□□□ 0.36
CBWD3-211ENST00000615061 ITIH6Q6UXX5 1313 aa17.29■□□□□ 0.36
CBWD3-211ENST00000615061 A0A1W2PQF6 199 aa17.29■□□□□ 0.36
CBWD3-211ENST00000615061 TYW5A2RUC4 315 aaKnown RBP17.29■□□□□ 0.36
CBWD3-211ENST00000615061 ATMINO43313 823 aaPredicted RBP17.29■□□□□ 0.36
CBWD3-211ENST00000615061 GFRA3O60609 400 aa17.29■□□□□ 0.36
CBWD3-211ENST00000615061 PABPC1P11940 636 aaKnown RBP17.29■□□□□ 0.36
CBWD3-211ENST00000615061 HOXB2P14652 356 aa17.29■□□□□ 0.36
CBWD3-211ENST00000615061 IL12RB1P42701 662 aa17.29■□□□□ 0.36
CBWD3-211ENST00000615061 DGKEP52429 567 aa17.29■□□□□ 0.36
CBWD3-211ENST00000615061 RPL7AP62424 266 aaKnown RBP17.29■□□□□ 0.36
CBWD3-211ENST00000615061 ZBED6P86452 979 aa17.29■□□□□ 0.36
CBWD3-211ENST00000615061 LMAN2Q12907 356 aa17.29■□□□□ 0.36
CBWD3-211ENST00000615061 TDRD12Q587J7 1177 aaKnown RBP17.29■□□□□ 0.36
CBWD3-211ENST00000615061 KIAA1211LQ6NV74 962 aa17.29■□□□□ 0.36
CBWD3-211ENST00000615061 DNAJC24Q6P3W2 148 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms