RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 TAS2R50P59544 299 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 RPL15P61313 204 aaKnown RBP5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 ICA1Q05084 483 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 MORC3Q14149 939 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 PUM3Q15397 648 aaKnown RBP5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 PFKFB4Q16877 469 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 ANKRD40Q6AI12 368 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 TMEM88Q6PEY1 159 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 DHRS13Q6UX07 377 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 SPICE1Q8N0Z3 855 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 ARFGAP1Q8N6T3 406 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 Q8N9P0 234 aaPredicted RBP5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 FAM47BQ8NA70 645 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 KATNAL1Q9BW62 490 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 CCDC134Q9H6E4 229 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 FAM90A18PA6NE21 464 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 FAM90A16PA6NEW6 464 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 FAM90A9PA6NNJ1 464 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 FAM90A5PA8MXJ8 464 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 M0QYT0 321 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 CNTN5O94779 1100 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 KAT7O95251 611 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 TNFRSF6BO95407 300 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 BMP15O95972 392 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 ITGA2BP08514 1039 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 FAM90A15PP0C7V4 464 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 FAM90A14PP0C7W9 464 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 CYP19A1P11511 503 aaPredicted RBP5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 GRK5P34947 590 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 CDK7P50613 346 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 SF3A3Q12874 501 aaKnown RBP eCLIP5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 HNRNPA0Q13151 305 aaKnown RBP5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 C1orf228Q6PIY5 440 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.68□□□□□ -1.51e-6■■■■□ 19.6
SCAMP1-205ENST00000614488 NRACQ8N912 160 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 OR52N4Q8NGI2 321 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 TUBB6Q9BUF5 446 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 ABHD14AQ9BUJ0 271 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 SFXN1Q9H9B4 322 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 HEY2Q9UBP5 337 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 IPO11Q9UI26 975 aaKnown RBP5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 CNTN6Q9UQ52 1028 aa5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.68□□□□□ -1.5
SCAMP1-205ENST00000614488 CYP3A7-CYP3A51PA0A087WV96 503 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 SLC38A8A6NNN8 435 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 KIF28PB7ZC32 967 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 TLX3O43711 291 aaPredicted RBP5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 IGKV2-30P06310 120 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 CYP3A7P24462 503 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 SERPINF1P36955 418 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 FOXL2P58012 376 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 RBM6P78332 1123 aaKnown RBP5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 GALNT1Q10472 559 aaPredicted RBP5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 MTX1Q13505 466 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 ZNF569Q5MCW4 686 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 ATPAF1Q5TC12 328 aaPredicted RBP5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 LIPMQ5VYY2 423 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 RINLQ6ZS11 566 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 MYLK4Q86YV6 388 aaPredicted RBP5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 ADGRF3Q8IZF5 1079 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 RMDN3Q96TC7 470 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 RTKNQ9BST9 563 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 MLXIPQ9HAP2 919 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 HERC5Q9UII4 1024 aaKnown RBP5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 TRPC5Q9UL62 973 aaPredicted RBP5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 HS3ST3B1Q9Y662 390 aa5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 TTBK1Q5TCY1 1321 aaPredicted RBP5.67□□□□□ -1.5
SCAMP1-205ENST00000614488 TRBV5-3A0A0A0MS03 114 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 MBD3L5A6NJ08 208 aaPredicted RBP5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 EFCAB8A8MWE9 144 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 FAM3BP58499 235 aaPredicted RBP5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 BTBD16Q32M84 506 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 NFRKBQ6P4R8 1299 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 GGT6Q6P531 493 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 RAB11FIP2Q7L804 512 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 ADGRF4Q8IZF3 695 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 PAQR4Q8N4S7 273 aaPredicted RBP5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 ARL14EPQ8N8R7 260 aaPredicted RBP5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 SLC44A5Q8NCS7 719 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 MPHOSPH6Q99547 160 aaKnown RBP5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 PIMREGQ9BSJ6 248 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 HTATIP2Q9BUP3 242 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 MECRQ9BV79 373 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 TAGLN3Q9UI15 199 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 AGO2Q9UKV8 859 aaKnown RBP5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 RAB21Q9UL25 225 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 SLC12A4Q9UP95 1085 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 DAAM1Q9Y4D1 1078 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 CACNA1IQ9P0X4 2223 aa5.66□□□□□ -1.5
SCAMP1-205ENST00000614488 TBC1D3DA0A087WVF3 549 aa5.65□□□□□ -1.5
SCAMP1-205ENST00000614488 TBC1D3IA0A087WXS9 549 aa5.65□□□□□ -1.5
SCAMP1-205ENST00000614488 TBC1D3EA0A087X179 549 aa5.65□□□□□ -1.5
SCAMP1-205ENST00000614488 TBC1D3KA0A087X1G2 549 aa5.65□□□□□ -1.5
SCAMP1-205ENST00000614488 TBC1D3BA6NDS4 549 aa5.65□□□□□ -1.5
SCAMP1-205ENST00000614488 TBC1D3FA6NER0 549 aaPredicted RBP5.65□□□□□ -1.5
SCAMP1-205ENST00000614488 TBC1D3LB9A6J9 549 aa5.65□□□□□ -1.5
SCAMP1-205ENST00000614488 F5H423 210 aaPredicted RBP5.65□□□□□ -1.5
SCAMP1-205ENST00000614488 ACKR2O00590 384 aa5.65□□□□□ -1.5
SCAMP1-205ENST00000614488 PRPF4O43172 522 aaKnown RBP eCLIP5.65□□□□□ -1.5
SCAMP1-205ENST00000614488 ACTL6BO94805 426 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms