RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 ABLIM3O94929 683 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 ARHGEF15O94989 841 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 URODP06132 367 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 PPP2R5DQ14738 602 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 DENND2CQ68D51 928 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 RELL1Q8IUW5 271 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 VPS52Q8N1B4 723 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 ZCCHC9Q8N567 271 aaKnown RBP18.26■□□□□ 0.51
GEN1-208ENST00000614478 TAB3Q8N5C8 712 aaPredicted RBP18.26■□□□□ 0.51
GEN1-208ENST00000614478 OR2W6PQ8NHA6 318 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 RTP4Q96DX8 246 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 HAPLN3Q96S86 360 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 SIK2Q9H0K1 926 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.26■□□□□ 0.51
GEN1-208ENST00000614478 MAGED2Q9UNF1 606 aaPredicted RBP18.26■□□□□ 0.51
GEN1-208ENST00000614478 PAGE1O75459 146 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 LRIG2O94898 1065 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 SEC24AO95486 1093 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 ACTN2P35609 894 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 PPM1AP35813 382 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 BMPR1AP36894 532 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 ERVK-21P61565 698 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 SKOR1P84550 965 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 TPGS2Q68CL5 300 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 HOOK3Q86VS8 718 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 PPIL6Q8IXY8 311 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 NETO2Q8NC67 525 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 TFB1MQ8WVM0 346 aaKnown RBP18.26■□□□□ 0.51
GEN1-208ENST00000614478 CPT1BQ92523 772 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 CEP295NLQ96MC4 621 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 QKIQ96PU8 341 aaKnown RBP eCLIP18.26■□□□□ 0.51
GEN1-208ENST00000614478 TMEM51Q9NW97 253 aa18.26■□□□□ 0.51
GEN1-208ENST00000614478 FARP1Q9Y4F1 1045 aaPredicted RBP18.26■□□□□ 0.51
GEN1-208ENST00000614478 TMEM265A0A087WTH1 108 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 KCNU1A8MYU2 1149 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 HACD1B0YJ81 288 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 C5orf67F2Z3F1 127 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 TBX18O95935 607 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 EPHB2P29323 1055 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 CTNNB1P35222 781 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 EFEMP1Q12805 493 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 FAM182AQ5T1J6 154 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 AUTS2Q8WXX7 1259 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 PRCCQ92733 491 aaPredicted RBP18.25■□□□□ 0.51
GEN1-208ENST00000614478 C17orf80Q9BSJ5 609 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 TTLL2Q9BWV7 592 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 CDC42EP4Q9H3Q1 356 aaKnown RBP18.25■□□□□ 0.51
GEN1-208ENST00000614478 CYP4F11Q9HBI6 524 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 OLA1Q9NTK5 396 aaKnown RBP18.25■□□□□ 0.51
GEN1-208ENST00000614478 PAK5Q9P286 719 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 SHOC2Q9UQ13 582 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 TLR6Q9Y2C9 796 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 SZT2Q5T011 3432 aa18.25■□□□□ 0.51
GEN1-208ENST00000614478 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.24■□□□□ 0.51
GEN1-208ENST00000614478 RIPK2O43353 540 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 RB1P06400 928 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 SRGAP2BP0DMP2 458 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 TBX4P57082 545 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 SLC29A2Q14542 456 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 UBAP2Q5T6F2 1119 aaKnown RBP18.24■□□□□ 0.51
GEN1-208ENST00000614478 PDZD4Q76G19 769 aaPredicted RBP18.24■□□□□ 0.51
GEN1-208ENST00000614478 SLC39A13Q96H72 371 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 LGMNQ99538 433 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 HSFX1Q9UBD0 423 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 MOCS2O96007 188 aaPredicted RBP18.24■□□□□ 0.51
GEN1-208ENST00000614478 ZDHHC11BP0C7U3 371 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 BASP1P80723 227 aaKnown RBP18.24■□□□□ 0.51
GEN1-208ENST00000614478 IFFO1Q0D2I5 559 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 RAB33AQ14088 237 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 C10orf120Q5SQS8 335 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 ANKRD22Q5VYY1 191 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 HEATR6Q6AI08 1181 aaKnown RBP18.24■□□□□ 0.51
GEN1-208ENST00000614478 KDM7AQ6ZMT4 941 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 ARFGAP2Q8N6H7 521 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 NAT8LQ8N9F0 302 aa18.24■□□□□ 0.51
GEN1-208ENST00000614478 RBM15Q96T37 977 aaKnown RBP eCLIP18.24■□□□□ 0.517e-7■■■■□ 24.5
GEN1-208ENST00000614478 MRPL17Q9NRX2 175 aaKnown RBP18.24■□□□□ 0.51
GEN1-208ENST00000614478 SMAPO00193 183 aa18.23■□□□□ 0.51
GEN1-208ENST00000614478 SHOX2O60902 331 aaPredicted RBP18.23■□□□□ 0.51
GEN1-208ENST00000614478 FGF18O76093 207 aa18.23■□□□□ 0.51
GEN1-208ENST00000614478 SLC2A3P11169 496 aa18.23■□□□□ 0.51
GEN1-208ENST00000614478 VAV1P15498 845 aa18.23■□□□□ 0.51
GEN1-208ENST00000614478 PDK1Q15118 436 aa18.23■□□□□ 0.51
GEN1-208ENST00000614478 ZNF771Q7L3S4 317 aaPredicted RBP18.23■□□□□ 0.51
GEN1-208ENST00000614478 SPRED2Q7Z698 418 aa18.23■□□□□ 0.51
GEN1-208ENST00000614478 TP53INP2Q8IXH6 220 aa18.23■□□□□ 0.51
GEN1-208ENST00000614478 CCDC110Q8TBZ0 833 aa18.23■□□□□ 0.51
GEN1-208ENST00000614478 HTR3CQ8WXA8 447 aa18.23■□□□□ 0.51
GEN1-208ENST00000614478 FCRL2Q96LA5 508 aaPredicted RBP18.23■□□□□ 0.51
GEN1-208ENST00000614478 ROPN1BQ9BZX4 212 aaPredicted RBP18.23■□□□□ 0.51
GEN1-208ENST00000614478 ROPN1Q9HAT0 212 aaPredicted RBP18.23■□□□□ 0.51
GEN1-208ENST00000614478 XPO7Q9UIA9 1087 aaKnown RBP18.23■□□□□ 0.51
GEN1-208ENST00000614478 TCRBV7S3A2A0A539 114 aa18.22■□□□□ 0.51
GEN1-208ENST00000614478 GOLGA8MH3BSY2 632 aa18.22■□□□□ 0.51
GEN1-208ENST00000614478 SOX1O00570 391 aaPredicted RBP18.22■□□□□ 0.51
GEN1-208ENST00000614478 PPP1R12AO14974 1030 aaPredicted RBP18.22■□□□□ 0.51
GEN1-208ENST00000614478 GCATO75600 419 aa18.22■□□□□ 0.51
GEN1-208ENST00000614478 SHBGP04278 402 aa18.22■□□□□ 0.51
GEN1-208ENST00000614478 LMAN1P49257 510 aa18.22■□□□□ 0.51
GEN1-208ENST00000614478 AP1B1Q10567 949 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms