RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 AIPL1Q9NZN9 384 aa11.15□□□□□ -0.63
FAM3A-221ENST00000612856 HACD3Q9P035 362 aa11.15□□□□□ -0.63
FAM3A-221ENST00000612856 FAM187AA6NFU0 413 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 CCL16O15467 120 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 ASS1P00966 412 aaKnown RBP11.14□□□□□ -0.63
FAM3A-221ENST00000612856 PAEPP09466 180 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 PHBP35232 272 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 LMNB2Q03252 620 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 TAPT1Q6NXT6 567 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 MYLPFQ96A32 169 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 ZBED3Q96IU2 234 aaPredicted RBP11.14□□□□□ -0.63
FAM3A-221ENST00000612856 ATXN10Q9UBB4 475 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 CENPFP49454 3210 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 ARVCFO00192 962 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 O00370 1275 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 ATXN3P54252 364 aaPredicted RBP11.14□□□□□ -0.63
FAM3A-221ENST00000612856 RPL10AP62906 217 aaKnown RBP11.14□□□□□ -0.63
FAM3A-221ENST00000612856 BST2Q10589 180 aaKnown RBP11.14□□□□□ -0.63
FAM3A-221ENST00000612856 OR6K2Q8NGY2 324 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 TLCD1Q96CP7 247 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 PPP1R36Q96LQ0 422 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 TRABDQ9H4I3 376 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 ARHGAP28Q9P2N2 729 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 GTF2IRD1Q9UHL9 959 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 TDRKHQ9Y2W6 561 aaKnown RBP11.14□□□□□ -0.63
FAM3A-221ENST00000612856 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.14□□□□□ -0.63
FAM3A-221ENST00000612856 TPH1P17752 444 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 GABRR2P28476 465 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 CHRNA3P32297 505 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 VCPP55072 806 aaKnown RBP11.14□□□□□ -0.63
FAM3A-221ENST00000612856 SLC34A1Q06495 639 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 ZNF177Q13360 481 aaPredicted RBP11.14□□□□□ -0.63
FAM3A-221ENST00000612856 TUSC3Q13454 348 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 PRR23CQ6ZRP0 262 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.14□□□□□ -0.63
FAM3A-221ENST00000612856 EPS8L1Q8TE68 723 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 KRT35Q92764 455 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 OLFM3Q96PB7 478 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 PCYT2Q99447 389 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 TRIM55Q9BYV6 548 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 BFARQ9NZS9 450 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 TLK1Q9UKI8 766 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 USP18Q9UMW8 372 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 AP4E1Q9UPM8 1137 aa11.14□□□□□ -0.63
FAM3A-221ENST00000612856 SF3B1O75533 1304 aaKnown RBP eCLIP11.14□□□□□ -0.63
FAM3A-221ENST00000612856 USP1O94782 785 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 HSPA6P17066 643 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 ICAM3P32942 547 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 MBTD1Q05BQ5 628 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 RAD51Q06609 339 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 DHX34Q14147 1143 aaKnown RBP11.13□□□□□ -0.63
FAM3A-221ENST00000612856 RD3Q7Z3Z2 195 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 GABPB2Q8TAK5 448 aaPredicted RBP11.13□□□□□ -0.63
FAM3A-221ENST00000612856 PLEKHO2Q8TD55 490 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 GRAMD1AQ96CP6 724 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 MCRS1Q96EZ8 462 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 ZNF184Q99676 751 aaPredicted RBP11.13□□□□□ -0.63
FAM3A-221ENST00000612856 TMEM134Q9H6X4 195 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 UVRAGQ9P2Y5 699 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 NAALADL1Q9UQQ1 740 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 ANGPTL3Q9Y5C1 460 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 GOLGA8TH3BQL2 631 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 H7C4K7 107 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 P4HA2O15460 535 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 EN2P19622 333 aaPredicted RBP11.13□□□□□ -0.63
FAM3A-221ENST00000612856 ARL2P36404 184 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 RPS6KA2Q15349 733 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 STILQ15468 1287 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 ARHGAP15Q53QZ3 475 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 IYDQ6PHW0 289 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 WDR60Q8WVS4 1066 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 C11orf49Q9H6J7 331 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 SIX2Q9NPC8 291 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 MARCH2Q9P0N8 246 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 WASF2Q9Y6W5 498 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 B4GALT4O60513 344 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 PIRTP0C851 137 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 AKT1P31749 480 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 HNRNPH3P31942 346 aaKnown RBP11.13□□□□□ -0.63
FAM3A-221ENST00000612856 SLC11A2P49281 568 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 ADARP55265 1226 aaKnown RBP11.13□□□□□ -0.63
FAM3A-221ENST00000612856 ELAVL2Q12926 359 aaKnown RBP11.13□□□□□ -0.63
FAM3A-221ENST00000612856 CYTH1Q15438 398 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 TRIP10Q15642 601 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 CCDC92Q53HC0 331 aaPredicted RBP11.13□□□□□ -0.63
FAM3A-221ENST00000612856 SLFN11Q7Z7L1 901 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 LRRC43Q8N309 656 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 KREMEN1Q96MU8 473 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 MRPL9Q9BYD2 267 aaKnown RBP11.13□□□□□ -0.63
FAM3A-221ENST00000612856 OCEL1Q9H607 264 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 FAM186AA6NE01 2351 aa11.13□□□□□ -0.63
FAM3A-221ENST00000612856 CCDC195A0A1B0GUA6 201 aa11.12□□□□□ -0.63
FAM3A-221ENST00000612856 TBC1D3BA6NDS4 549 aa11.12□□□□□ -0.63
FAM3A-221ENST00000612856 C9IYK1 514 aa11.12□□□□□ -0.63
FAM3A-221ENST00000612856 F5H5T6 163 aa11.12□□□□□ -0.63
FAM3A-221ENST00000612856 MT-ND3P03897 115 aa11.12□□□□□ -0.63
FAM3A-221ENST00000612856 TMEM253P0C7T8 217 aa11.12□□□□□ -0.63
FAM3A-221ENST00000612856 RARGP13631 454 aa11.12□□□□□ -0.63
FAM3A-221ENST00000612856 PTPN4P29074 926 aa11.12□□□□□ -0.63
FAM3A-221ENST00000612856 MYH11P35749 1972 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms