RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 TOMM70O94826 608 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 MT-CO1P00395 513 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 ATXN1P54253 815 aaKnown RBP13.47□□□□□ -0.25
TCF3-220ENST00000611869 FNBP1LQ5T0N5 605 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 SPRYD7Q5W111 196 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 IFNEQ86WN2 208 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 CNPY4Q8N129 248 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 CSPG4P5Q96PW8 444 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 KCNK16Q96T55 309 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 ZBTB18Q99592 522 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 GPR63Q9BZJ6 419 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 VCX3AQ9NNX9 186 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 LATS2Q9NRM7 1088 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 LSM7Q9UK45 103 aaKnown RBP13.47□□□□□ -0.25
TCF3-220ENST00000611869 TRHDEQ9UKU6 1024 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 PTPN4P29074 926 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 HADHAP40939 763 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 GPD2P43304 727 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 RAD51Q06609 339 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 PDK4Q16654 411 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 BRI3BPQ8WY22 251 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 EBNA1BP2Q99848 306 aaKnown RBP13.46□□□□□ -0.25
TCF3-220ENST00000611869 CDH9Q9ULB4 789 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 MYH15Q9Y2K3 1946 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 C2CD4BA6NLJ0 364 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 STX7O15400 261 aaKnown RBP13.46□□□□□ -0.25
TCF3-220ENST00000611869 PHGDHO43175 533 aaKnown RBP13.46□□□□□ -0.25
TCF3-220ENST00000611869 PAPSS1O43252 624 aaPredicted RBP13.46□□□□□ -0.25
TCF3-220ENST00000611869 DNAJC6O75061 913 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 ANP32DO95626 131 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 APOA4P06727 396 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 NFKB1P19838 968 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 CALB2P22676 271 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 GRK2P25098 689 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 IL1R2P27930 398 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 FLT3LGP49771 235 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 NUDT2P50583 147 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 FKBP1BP68106 108 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 RNASEH2BQ5TBB1 312 aaKnown RBP13.46□□□□□ -0.25
TCF3-220ENST00000611869 ZNF470Q6ECI4 717 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 RGMBQ6NW40 437 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 YTHDF3Q7Z739 585 aaKnown RBP13.46□□□□□ -0.25
TCF3-220ENST00000611869 SPOCK2Q92563 424 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 P2RY11Q96G91 374 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 UBE2OQ9C0C9 1292 aaKnown RBP13.46□□□□□ -0.25
TCF3-220ENST00000611869 SLC17A7Q9P2U7 560 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 H0Y626 953 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 TPP1O14773 563 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 ATP6V1G2O95670 118 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 ALADP13716 330 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 NNMTP40261 264 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 SCNN1BP51168 640 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 RABGGTBP53611 331 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 MAPRE2Q15555 327 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 TRIP10Q15642 601 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 TMTC4Q5T4D3 741 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 AGAP9Q5VTM2 703 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 PSTKQ8IV42 348 aaKnown RBP13.46□□□□□ -0.25
TCF3-220ENST00000611869 POU5F2Q8N7G0 328 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 DNAJC9Q8WXX5 260 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 TLCD1Q96CP7 247 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 SERPINB11Q96P15 392 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 MRPL1Q9BYD6 325 aaKnown RBP13.46□□□□□ -0.25
TCF3-220ENST00000611869 YIPF3Q9GZM5 350 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 GPAMQ9HCL2 828 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 DERAQ9Y315 318 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 LTBP3Q9NS15 1303 aa13.46□□□□□ -0.25
TCF3-220ENST00000611869 RAMP2O60895 175 aa13.46□□□□□ -0.26
TCF3-220ENST00000611869 SLC1A6P48664 564 aa13.46□□□□□ -0.26
TCF3-220ENST00000611869 CDK16Q00536 496 aa13.46□□□□□ -0.26
TCF3-220ENST00000611869 OGDHQ02218 1023 aa13.46□□□□□ -0.26
TCF3-220ENST00000611869 SLC25A52Q3SY17 297 aa13.46□□□□□ -0.26
TCF3-220ENST00000611869 B3GNT9Q6UX72 402 aa13.46□□□□□ -0.26
TCF3-220ENST00000611869 PYROXD2Q8N2H3 581 aa13.46□□□□□ -0.26
TCF3-220ENST00000611869 ARRDC4Q8NCT1 418 aa13.46□□□□□ -0.26
TCF3-220ENST00000611869 FBXO44Q9H4M3 255 aa13.46□□□□□ -0.26
TCF3-220ENST00000611869 DDX60Q8IY21 1712 aaKnown RBP13.45□□□□□ -0.26
TCF3-220ENST00000611869 STRCQ7RTU9 1775 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 TBKBP1A7MCY6 615 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 PQBP1O60828 265 aaKnown RBP13.45□□□□□ -0.26
TCF3-220ENST00000611869 LGR5O75473 907 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 DNAJB2P25686 324 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 OR1E1P30953 314 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 PTPN7P35236 360 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 KCNJ2P63252 427 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 MRNIPQ6NTE8 343 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 LCA5Q86VQ0 697 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 GLIS1Q8NBF1 620 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 GIPC2Q8TF65 315 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 CLEC4CQ8WTT0 213 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 SMPD4Q9NXE4 827 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 LOC102724159A0A0B4J2E5 919 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 RNF103-CHMP3A0A140T963 221 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 FAM237BA0A1B0GVD1 139 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 CBX4O00257 560 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 PPEF2O14830 753 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 ANGPT2O15123 496 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 FAM155BO75949 473 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 ATG7O95352 703 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 SERPINE1P05121 402 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms