RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 TRIML2Q8N7C3 387 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 MIPOL1Q8TD10 442 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 IFT43Q96FT9 208 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 CERS2Q96G23 380 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 P2RY11Q96G91 374 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 CADM1Q9BY67 442 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 MRPL1Q9BYD6 325 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 TCF7L2Q9NQB0 619 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 PFDN4Q9NQP4 134 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 CHST12Q9NRB3 414 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 NR2E3Q9Y5X4 410 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 MRPL42Q9Y6G3 142 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 CLDN5O00501 218 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 NCAM2O15394 837 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 UGT1A9O60656 530 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 ANXA9O76027 345 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 STBD1O95210 358 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 TGDSO95455 350 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 C22orf31O95567 290 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 CCNB1P14635 433 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 ATP6V1C1P21283 382 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 MATKP42679 507 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 SLC12A1Q13621 1099 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 POU6F1Q14863 301 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 CCDC153Q494R4 210 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 KHDC1Q4VXA5 237 aaKnown RBP8.9□□□□□ -0.98
LIG4-204ENST00000611712 WSCD1Q658N2 575 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 CHSY1Q86X52 802 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 LRRC52Q8N7C0 313 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 OLFM3Q96PB7 478 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 ZNF184Q99676 751 aaPredicted RBP8.9□□□□□ -0.98
LIG4-204ENST00000611712 KATNAL1Q9BW62 490 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 UGT1A7Q9HAW7 530 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 UGT1A10Q9HAW8 530 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 UGT1A8Q9HAW9 530 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 POPDC2Q9HBU9 364 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 IL1RAPL1Q9NZN1 696 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 ZNF212Q9UDV6 495 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 CNTN6Q9UQ52 1028 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 ACOT9Q9Y305 439 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 KAT6AQ92794 2004 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 C17orf102A2RUQ5 167 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 TYROBPO43914 113 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 TSPAN1O60635 241 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 YBX3P16989 372 aaKnown RBP eCLIP8.9□□□□□ -0.98
LIG4-204ENST00000611712 PTPN1P18031 435 aaKnown RBP8.9□□□□□ -0.98
LIG4-204ENST00000611712 CDH5P33151 784 aaPredicted RBP8.9□□□□□ -0.98
LIG4-204ENST00000611712 IRX1P78414 480 aaPredicted RBP8.9□□□□□ -0.98
LIG4-204ENST00000611712 PPIL2Q13356 520 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 GNASQ5JWF2 1037 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 CDCA2Q69YH5 1023 aaPredicted RBP8.9□□□□□ -0.98
LIG4-204ENST00000611712 RIPOR1Q6ZS17 1223 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 CMC1Q7Z7K0 106 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 CCDC117Q8IWD4 279 aaPredicted RBP8.9□□□□□ -0.98
LIG4-204ENST00000611712 TNS4Q8IZW8 715 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 ARHGAP18Q8N392 663 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 GALNT4Q8N4A0 578 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 B3GALNT2Q8NCR0 500 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 PYDC1Q8WXC3 89 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 ATP6V1E2Q96A05 226 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 APBA2Q99767 749 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 MMADHCQ9H3L0 296 aaPredicted RBP8.9□□□□□ -0.98
LIG4-204ENST00000611712 CATSPERBQ9H7T0 1116 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 GOLGA2P5Q9HBQ8 144 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 ZNF112Q9UJU3 913 aa8.9□□□□□ -0.98
LIG4-204ENST00000611712 CASTOR2A6NHX0 329 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 MDM4O15151 490 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 BIRC5O15392 142 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 METTL18O95568 372 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 THP07101 528 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 USP17L7P0C7H9 530 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 STMN1P16949 149 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 NPR3P17342 541 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 LRRC8EQ6NSJ5 796 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 IRGCQ6NXR0 463 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 IGDCC3Q8IVU1 814 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 PYROXD2Q8N2H3 581 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 ACMSDQ8TDX5 336 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 LPIN3Q9BQK8 851 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 BCO2Q9BYV7 579 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 NMRAL1Q9HBL8 299 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 MRPL40Q9NQ50 206 aaKnown RBP8.9□□□□□ -0.99
LIG4-204ENST00000611712 SYBUQ9NX95 663 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 TAS2R1Q9NYW7 299 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.9□□□□□ -0.99
LIG4-204ENST00000611712 PDP2Q9P2J9 529 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 MORF4L1Q9UBU8 362 aa8.9□□□□□ -0.99
LIG4-204ENST00000611712 AAR2Q9Y312 384 aaKnown RBP8.9□□□□□ -0.99
LIG4-204ENST00000611712 CXorf49A8MYA2 514 aaPredicted RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 PHGDHO43175 533 aaKnown RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 ZMPSTE24O75844 475 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 CSH1P0DML2 217 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 CSH2P0DML3 217 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 ERCC2P18074 760 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 CRHR1P34998 444 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 ABCE1P61221 599 aaKnown RBP8.89□□□□□ -0.99
LIG4-204ENST00000611712 GALNTL6Q49A17 601 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 RFWD3Q6PCD5 774 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 LAYNQ6UX15 382 aa8.89□□□□□ -0.99
LIG4-204ENST00000611712 RINLQ6ZS11 566 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms