RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 PLK4O00444 970 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 XPO1O14980 1071 aaKnown RBP16.46■□□□□ 0.23
HDDC2-210ENST00000609574 IRAK2O43187 625 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 PAPSS1O43252 624 aaPredicted RBP16.46■□□□□ 0.23
HDDC2-210ENST00000609574 ARRB1P49407 418 aaPredicted RBP16.46■□□□□ 0.23
HDDC2-210ENST00000609574 NFIL3Q16649 462 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 SGO2Q562F6 1265 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 MPP7Q5T2T1 576 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 BSPRYQ5W0U4 402 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 ADIPOR2Q86V24 386 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.46■□□□□ 0.23
HDDC2-210ENST00000609574 SLC4A11Q8NBS3 891 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 FBXL13Q8NEE6 735 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 PIP4K2CQ8TBX8 421 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 BAP1Q92560 729 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 CNDP2Q96KP4 475 aaKnown RBP16.46■□□□□ 0.23
HDDC2-210ENST00000609574 ELF4Q99607 663 aaPredicted RBP16.46■□□□□ 0.23
HDDC2-210ENST00000609574 GDF3Q9NR23 364 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 RAB20Q9NX57 234 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 SFMBT1Q9UHJ3 866 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 STOML2Q9UJZ1 356 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 TPX2Q9ULW0 747 aaKnown RBP16.46■□□□□ 0.23
HDDC2-210ENST00000609574 ASXL3Q9C0F0 2248 aa16.46■□□□□ 0.23
HDDC2-210ENST00000609574 GCN1Q92616 2671 aaKnown RBP16.45■□□□□ 0.22
HDDC2-210ENST00000609574 A0A1W2PPC4 97 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 TBL1XO60907 577 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 RFPL3O75679 317 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 MOCS3O95396 460 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 ASLP04424 464 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 ZSCAN22P10073 491 aaPredicted RBP16.45■□□□□ 0.22
HDDC2-210ENST00000609574 CD19P15391 556 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 MXI1P50539 228 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 RAD23BP54727 409 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 SEMG2Q02383 582 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 BST2Q10589 180 aaKnown RBP16.45■□□□□ 0.22
HDDC2-210ENST00000609574 GOLGA7BQ2TAP0 167 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 LAYNQ6UX15 382 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 MFN1Q8IWA4 741 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 EDEM1Q92611 657 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 BBC3Q96PG8 261 aaPredicted RBP16.45■□□□□ 0.22
HDDC2-210ENST00000609574 PABPC3Q9H361 631 aaKnown RBP16.45■□□□□ 0.22
HDDC2-210ENST00000609574 STIM2Q9P246 746 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 CEP83Q9Y592 693 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 SLCO1B1Q9Y6L6 691 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 CABIN1Q9Y6J0 2220 aa16.45■□□□□ 0.22
HDDC2-210ENST00000609574 CAPN9O14815 690 aa16.44■□□□□ 0.22
HDDC2-210ENST00000609574 ACTN4O43707 911 aaKnown RBP16.44■□□□□ 0.22
HDDC2-210ENST00000609574 RNASEH2AO75792 299 aaKnown RBP16.44■□□□□ 0.22
HDDC2-210ENST00000609574 C7P10643 843 aa16.44■□□□□ 0.22
HDDC2-210ENST00000609574 EPB41P11171 864 aaKnown RBP16.44■□□□□ 0.22
HDDC2-210ENST00000609574 CD38P28907 300 aa16.44■□□□□ 0.22
HDDC2-210ENST00000609574 GALCP54803 685 aa16.44■□□□□ 0.22
HDDC2-210ENST00000609574 ADIGQ0VDE8 80 aa16.44■□□□□ 0.22
HDDC2-210ENST00000609574 RNF219Q5W0B1 726 aaPredicted RBP16.44■□□□□ 0.22
HDDC2-210ENST00000609574 NUGGCQ68CJ6 796 aa16.44■□□□□ 0.22
HDDC2-210ENST00000609574 KIAA0907Q7Z7F0 614 aaPredicted RBP16.44■□□□□ 0.22
HDDC2-210ENST00000609574 GATAD2AQ86YP4 633 aa16.44■□□□□ 0.22
HDDC2-210ENST00000609574 OR2T34Q8NGX1 318 aa16.44■□□□□ 0.22
HDDC2-210ENST00000609574 SLC39A7Q92504 469 aa16.44■□□□□ 0.22
HDDC2-210ENST00000609574 NDRG1Q92597 394 aaKnown RBP16.44■□□□□ 0.22
HDDC2-210ENST00000609574 CCDC34Q96HJ3 373 aa16.44■□□□□ 0.22
HDDC2-210ENST00000609574 RSPH9Q9H1X1 276 aaPredicted RBP16.44■□□□□ 0.22
HDDC2-210ENST00000609574 TSPAN16Q9UKR8 245 aa16.44■□□□□ 0.22
HDDC2-210ENST00000609574 KIAA1257Q9ULG3 409 aa16.44■□□□□ 0.22
HDDC2-210ENST00000609574 PLXNB3Q9ULL4 1909 aa16.44■□□□□ 0.22
HDDC2-210ENST00000609574 SMG1Q96Q15 3661 aaKnown RBP16.44■□□□□ 0.22
HDDC2-210ENST00000609574 CETN3O15182 167 aa16.43■□□□□ 0.22
HDDC2-210ENST00000609574 F13A1P00488 732 aa16.43■□□□□ 0.22
HDDC2-210ENST00000609574 NUCB2P80303 420 aa16.43■□□□□ 0.22
HDDC2-210ENST00000609574 NCEH1Q6PIU2 408 aa16.43■□□□□ 0.22
HDDC2-210ENST00000609574 OXR1Q8N573 874 aa16.43■□□□□ 0.22
HDDC2-210ENST00000609574 EID2Q8N6I1 236 aa16.43■□□□□ 0.22
HDDC2-210ENST00000609574 HJURPQ8NCD3 748 aaPredicted RBP16.43■□□□□ 0.22
HDDC2-210ENST00000609574 SLC6A18Q96N87 628 aa16.43■□□□□ 0.22
HDDC2-210ENST00000609574 CNGB3Q9NQW8 809 aa16.43■□□□□ 0.22
HDDC2-210ENST00000609574 RCOR1Q9UKL0 485 aa16.43■□□□□ 0.22
HDDC2-210ENST00000609574 MAPK8IP1Q9UQF2 711 aa16.43■□□□□ 0.22
HDDC2-210ENST00000609574 A0A1B0GVL5 298 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 TARSL2A2RTX5 802 aaKnown RBP16.42■□□□□ 0.22
HDDC2-210ENST00000609574 ACSL4O60488 711 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 MAGEC1O60732 1142 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 IGHV4-34P06331 123 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 SETSIPP0DME0 302 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 LCP1P13796 627 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 CMA1P23946 247 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 CD70P32970 193 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 NNMTP40261 264 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 CCR5P51681 352 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 TARDBPQ13148 414 aaKnown RBP eCLIP16.42■□□□□ 0.223e-6■■□□□ 14.4
HDDC2-210ENST00000609574 ILKQ13418 452 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 CDH18Q13634 790 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 CST6Q15828 149 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 HNRNPA1L2Q32P51 320 aaKnown RBP16.42■□□□□ 0.22
HDDC2-210ENST00000609574 HS1BP3Q53T59 392 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 KCNT1Q5JUK3 1230 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 PRAMEF14Q5SWL7 426 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 PIK3R6Q5UE93 754 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 SND1Q7KZF4 910 aaKnown RBP eCLIP16.42■□□□□ 0.22
HDDC2-210ENST00000609574 DHX40Q8IX18 779 aaKnown RBP16.42■□□□□ 0.22
HDDC2-210ENST00000609574 GUF1Q8N442 669 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms