RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 PTPRBP23467 1997 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 MYO16Q9Y6X6 1858 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 GON4LQ3T8J9 2241 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 A0A1B0GTW7 788 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 ANO9A1A5B4 782 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 FLRT2O43155 660 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 NDUFS2O75306 463 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 KIF20AO95235 890 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 IL18RAPO95256 599 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 RPL10AP62906 217 aaKnown RBP12.86□□□□□ -0.35
HLA-F-230ENST00000606273 BNC1Q01954 994 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 ADAM9Q13443 819 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 PSMD6Q15008 389 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 EDRF1Q3B7T1 1238 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 WSCD1Q658N2 575 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 CEP135Q66GS9 1140 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 TREML1Q86YW5 311 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 ZC3H3Q8IXZ2 948 aaKnown RBP12.86□□□□□ -0.35
HLA-F-230ENST00000606273 KIAA1958Q8N8K9 716 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 C1orf127Q8N9H9 656 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 DHTKD1Q96HY7 919 aaPredicted RBP12.86□□□□□ -0.35
HLA-F-230ENST00000606273 CD248Q9HCU0 757 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 BTBD3Q9Y2F9 522 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 DERAQ9Y315 318 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 C2CD2Q9Y426 696 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 PI4KAP42356 2102 aa12.86□□□□□ -0.35
HLA-F-230ENST00000606273 TBC1D3BA6NDS4 549 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 LRRIQ3A6PVS8 624 aaPredicted RBP12.85□□□□□ -0.35
HLA-F-230ENST00000606273 B8ZZF3 427 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 TNFSF14O43557 240 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 WISP1O95388 367 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 DLATP10515 647 aaKnown RBP12.85□□□□□ -0.35
HLA-F-230ENST00000606273 HOXB2P14652 356 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 CYP2F1P24903 491 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 MATKP42679 507 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 TFAMQ00059 246 aaKnown RBP12.85□□□□□ -0.35
HLA-F-230ENST00000606273 SEMG2Q02383 582 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 KDSRQ06136 332 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 MYO1EQ12965 1108 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 NFE2Q16621 373 aaPredicted RBP12.85□□□□□ -0.35
HLA-F-230ENST00000606273 COX20Q5RI15 118 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 CCDC183Q5T5S1 534 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 CAVIN1Q6NZI2 390 aaKnown RBP12.85□□□□□ -0.35
HLA-F-230ENST00000606273 IL27RAQ6UWB1 636 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 DHRS13Q6UX07 377 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 TRMT11Q7Z4G4 463 aaKnown RBP12.85□□□□□ -0.35
HLA-F-230ENST00000606273 TMPRSS12Q86WS5 348 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 ZNF513Q8N8E2 541 aaPredicted RBP12.85□□□□□ -0.35
HLA-F-230ENST00000606273 PARD3BQ8TEW8 1205 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 MTMR12Q9C0I1 747 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 KIAA1586Q9HCI6 787 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 CD93Q9NPY3 652 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 INTS13Q9NVM9 706 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 DPP3Q9NY33 737 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 SIX4Q9UIU6 781 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.85□□□□□ -0.35
HLA-F-230ENST00000606273 NFE2L3Q9Y4A8 694 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 HECTD1Q9ULT8 2610 aa12.85□□□□□ -0.35
HLA-F-230ENST00000606273 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.84□□□□□ -0.35
HLA-F-230ENST00000606273 SLC9A3R1O14745 358 aaPredicted RBP12.84□□□□□ -0.35
HLA-F-230ENST00000606273 PSMA7O14818 248 aa12.84□□□□□ -0.35
HLA-F-230ENST00000606273 CER1O95813 267 aa12.84□□□□□ -0.35
HLA-F-230ENST00000606273 NTSR1P30989 418 aa12.84□□□□□ -0.35
HLA-F-230ENST00000606273 WASP42768 502 aa12.84□□□□□ -0.35
HLA-F-230ENST00000606273 TAF1BQ53T94 588 aaPredicted RBP12.84□□□□□ -0.35
HLA-F-230ENST00000606273 MIB1Q86YT6 1006 aa12.84□□□□□ -0.35
HLA-F-230ENST00000606273 DTWD1Q8N5C7 304 aa12.84□□□□□ -0.35
HLA-F-230ENST00000606273 IPO4Q8TEX9 1081 aaKnown RBP12.84□□□□□ -0.35
HLA-F-230ENST00000606273 TTC9Q92623 222 aa12.84□□□□□ -0.35
HLA-F-230ENST00000606273 ELMO3Q96BJ8 720 aa12.84□□□□□ -0.35
HLA-F-230ENST00000606273 NXPE2Q96DL1 559 aa12.84□□□□□ -0.35
HLA-F-230ENST00000606273 WBP1Q96G27 269 aa12.84□□□□□ -0.35
HLA-F-230ENST00000606273 CGRRF1Q99675 332 aa12.84□□□□□ -0.35
HLA-F-230ENST00000606273 GTPBP4Q9BZE4 634 aaKnown RBP12.84□□□□□ -0.35
HLA-F-230ENST00000606273 RNF38Q9H0F5 515 aa12.84□□□□□ -0.35
HLA-F-230ENST00000606273 ABCB6Q9NP58 842 aa12.84□□□□□ -0.35
HLA-F-230ENST00000606273 MYO18BQ8IUG5 2567 aa12.84□□□□□ -0.35
HLA-F-230ENST00000606273 SCN1AP35498 2009 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 SCAMP3O14828 347 aaKnown RBP12.83□□□□□ -0.36
HLA-F-230ENST00000606273 CST3P01034 146 aaPredicted RBP12.83□□□□□ -0.36
HLA-F-230ENST00000606273 ITGB3P05106 788 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 H2AFB1P0C5Y9 115 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 H2AFB2P0C5Z0 115 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 TRIM49P0CI25 452 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 TRIM49CP0CI26 452 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 PFKLP17858 780 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 POLR2BP30876 1174 aaKnown RBP12.83□□□□□ -0.36
HLA-F-230ENST00000606273 PDE6CP51160 858 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 SLC7A9P82251 487 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 LRRC63Q05C16 580 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 PPP3CAQ08209 521 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 PAK1Q13153 545 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 STIM1Q13586 685 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 KLHL40Q2TBA0 621 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 CCDC157Q569K6 752 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 C11orf57Q6ZUT1 292 aaPredicted RBP12.83□□□□□ -0.36
HLA-F-230ENST00000606273 NT5DC4Q86YG4 428 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 WFDC8Q8IUA0 241 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 WDR49Q8IV35 697 aa12.83□□□□□ -0.36
HLA-F-230ENST00000606273 FAM186BQ8IYM0 893 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms