RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 CDC14AQ9UNH5 594 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 ADAM23O75077 832 aa12.77□□□□□ -0.37
CDCA3-212ENST00000604599 HSPA4LO95757 839 aa12.77□□□□□ -0.37
CDCA3-212ENST00000604599 ZBED1O96006 694 aa12.77□□□□□ -0.37
CDCA3-212ENST00000604599 CCNE2O96020 404 aa12.77□□□□□ -0.37
CDCA3-212ENST00000604599 TCF7P36402 384 aaPredicted RBP12.77□□□□□ -0.37
CDCA3-212ENST00000604599 DENND1BQ6P3S1 775 aa12.77□□□□□ -0.37
CDCA3-212ENST00000604599 CASC4Q6P4E1 433 aa12.77□□□□□ -0.37
CDCA3-212ENST00000604599 SAMD3Q8N6K7 520 aa12.77□□□□□ -0.37
CDCA3-212ENST00000604599 C12orf43Q96C57 262 aaKnown RBP12.77□□□□□ -0.37
CDCA3-212ENST00000604599 MOCOSQ96EN8 888 aa12.77□□□□□ -0.37
CDCA3-212ENST00000604599 HAPLN2Q9GZV7 340 aa12.77□□□□□ -0.37
CDCA3-212ENST00000604599 TCF7L2Q9NQB0 619 aa12.77□□□□□ -0.37
CDCA3-212ENST00000604599 IGSF9Q9P2J2 1179 aa12.77□□□□□ -0.37
CDCA3-212ENST00000604599 HTR3EA5X5Y0 456 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 H3BNH8 94 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 PSMD12O00232 456 aaPredicted RBP12.76□□□□□ -0.37
CDCA3-212ENST00000604599 PLOD2O00469 737 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 NFIBO00712 420 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 CST3P01034 146 aaPredicted RBP12.76□□□□□ -0.37
CDCA3-212ENST00000604599 PRKCGP05129 697 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 GJA8P48165 433 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 CD151P48509 253 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 MRPS9P82933 396 aaKnown RBP12.76□□□□□ -0.37
CDCA3-212ENST00000604599 SH3PXD2AQ5TCZ1 1133 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 GPR141Q7Z602 305 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 ERLEC1Q96DZ1 483 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 TMA16Q96EY4 203 aaKnown RBP12.76□□□□□ -0.37
CDCA3-212ENST00000604599 SIGLEC10Q96LC7 697 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 PPP1R10Q96QC0 940 aaKnown RBP12.76□□□□□ -0.37
CDCA3-212ENST00000604599 PEBP4Q96S96 227 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 EBNA1BP2Q99848 306 aaKnown RBP12.76□□□□□ -0.37
CDCA3-212ENST00000604599 COA1Q9GZY4 146 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 BRD8Q9H0E9 1235 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 SDCBP2Q9H190 292 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 RSAD1Q9HA92 442 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 OLAHQ9NV23 265 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 CYTH4Q9UIA0 394 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 USP18Q9UMW8 372 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 STRCQ7RTU9 1775 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 K7EPI3 171 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 ENTPD3O75355 529 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 FUCA1P04066 466 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 CD19P15391 556 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 PRAMEP78395 509 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 DCAF6Q58WW2 860 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 EPGNQ6UW88 154 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 XKR5Q6UX68 686 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 ZNF534Q76KX8 674 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 CMASQ8NFW8 434 aaPredicted RBP12.76□□□□□ -0.37
CDCA3-212ENST00000604599 THAP11Q96EK4 314 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 MARK4Q96L34 752 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 FERMT1Q9BQL6 677 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 NTPCRQ9BSD7 190 aaKnown RBP12.76□□□□□ -0.37
CDCA3-212ENST00000604599 CDH19Q9H159 772 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 WDR41Q9HAD4 459 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 XPNPEP3Q9NQH7 507 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 CISHQ9NSE2 258 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 PSAT1Q9Y617 370 aa12.76□□□□□ -0.37
CDCA3-212ENST00000604599 MATN2O00339 956 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 ME2P23368 584 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 HARS2P49590 506 aaKnown RBP12.75□□□□□ -0.37
CDCA3-212ENST00000604599 TXNL4AP83876 142 aaKnown RBP12.75□□□□□ -0.37
CDCA3-212ENST00000604599 TIFABQ6ZNK6 161 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 FIBCD1Q8N539 461 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 ZC3H12CQ9C0D7 883 aaKnown RBP12.75□□□□□ -0.37
CDCA3-212ENST00000604599 TRNAU1APQ9NX07 287 aaKnown RBP12.75□□□□□ -0.37
CDCA3-212ENST00000604599 SQORQ9Y6N5 450 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 ARID2Q68CP9 1835 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 ZBTB11O95625 1053 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-212ENST00000604599 F7P08709 466 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-212ENST00000604599 MYCLP12524 364 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-212ENST00000604599 SP4Q02446 784 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 IKBKEQ14164 716 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 SLC9A4Q6AI14 798 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 NAPRTQ6XQN6 538 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 DCDC5Q6ZRR9 648 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 GPR180Q86V85 440 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 CARM1Q86X55 608 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 LRTOMTQ8WZ04 291 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 ATXN7L3BQ96GX2 97 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 CIB1Q99828 191 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 TRPV6Q9H1D0 765 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 BCAP29Q9UHQ4 241 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 RGSL1A5PLK6 1076 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 METTL18O95568 372 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 TRUB2O95900 331 aaKnown RBP12.75□□□□□ -0.37
CDCA3-212ENST00000604599 HMOX2P30519 316 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 ORC1Q13415 861 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 CDO1Q16878 200 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 TMEM198Q66K66 360 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 CMC1Q7Z7K0 106 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 FAM47BQ8NA70 645 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 DLG3Q92796 817 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 CPXM1Q96SM3 734 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 ACO2Q99798 780 aaKnown RBP12.75□□□□□ -0.37
CDCA3-212ENST00000604599 SLC29A1Q99808 456 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 FRMD8Q9BZ67 464 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-212ENST00000604599 PNPLA3Q9NST1 481 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 ANKEF1Q9NU02 776 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms