RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 GARTP22102 1010 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 SERPINB1P30740 379 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 RECQLP46063 649 aaPredicted RBP9.09□□□□□ -0.95
COMMD3-215ENST00000602574 DRG2P55039 364 aaKnown RBP9.09□□□□□ -0.95
COMMD3-215ENST00000602574 FOXK2Q01167 660 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 HERC3Q15034 1050 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 TCEAL1Q15170 157 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 LTB4RQ15722 352 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 DDR2Q16832 855 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 ARHGAP44Q17R89 818 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 TDRD12Q587J7 1177 aaKnown RBP9.09□□□□□ -0.95
COMMD3-215ENST00000602574 GARNL3Q5VVW2 1013 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 FAM109BQ6ICB4 259 aaPredicted RBP9.09□□□□□ -0.95
COMMD3-215ENST00000602574 SULT6B1Q6IMI4 303 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 ANKRD26P1Q6NSI1 321 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 UGT3A1Q6NUS8 523 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 G2E3Q7L622 706 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 SRBD1Q8N5C6 995 aaKnown RBP9.09□□□□□ -0.95
COMMD3-215ENST00000602574 DNAAF3Q8N9W5 541 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 PCSK9Q8NBP7 692 aaKnown RBP9.09□□□□□ -0.95
COMMD3-215ENST00000602574 SETD7Q8WTS6 366 aaKnown RBP9.09□□□□□ -0.95
COMMD3-215ENST00000602574 S100ZQ8WXG8 99 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 KLHL6Q8WZ60 621 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 TBATAQ96M53 351 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 TOX2Q96NM4 488 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 SLC6A15Q9H2J7 730 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 APEX2Q9UBZ4 518 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 PTBP2Q9UKA9 531 aaKnown RBP9.09□□□□□ -0.95
COMMD3-215ENST00000602574 BAG5Q9UL15 447 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 AXIN2Q9Y2T1 843 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 HEMK1Q9Y5R4 338 aaPredicted RBP9.09□□□□□ -0.95
COMMD3-215ENST00000602574 LMTK3Q96Q04 1460 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 TTC26A0AVF1 554 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 KCNN4O15554 427 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 ZNF623O75123 536 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 LTA4HP09960 611 aaKnown RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 ACTN1P12814 892 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 ITGALP20701 1170 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 NMT1P30419 496 aaKnown RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 PSMC5P62195 406 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 PTH1RQ03431 593 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 UBE3AQ05086 875 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 BTKQ06187 659 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 SF3A3Q12874 501 aaKnown RBP eCLIP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 TOP3AQ13472 1001 aaPredicted RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 KRT31Q15323 416 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 TRADDQ15628 312 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 NAB2Q15742 525 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 YIF1BQ5BJH7 314 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 ARSHQ5FYA8 562 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 TPGS2Q68CL5 300 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 ZNF425Q6IV72 752 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 LETMD1Q6P1Q0 360 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 FKBP9P1Q75LS8 142 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 WDR48Q8TAF3 677 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 CELF1Q92879 486 aaKnown RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 ASB2Q96Q27 587 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 RPF2Q9H7B2 306 aaKnown RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 SMARCAL1Q9NZC9 954 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 PKD2L1Q9P0L9 805 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 STOML2Q9UJZ1 356 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 AGO1Q9UL18 857 aaKnown RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 SPATA2Q9UM82 520 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 CCDC61Q9Y6R9 512 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 ARGFXA6NJG6 315 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 A8MVJ9 347 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 TARM1B6A8C7 271 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 CLDN25C9JDP6 229 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 EDF1O60869 148 aaKnown RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 KRT37O76014 449 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 MOCS3O95396 460 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 CHRNA1P02708 482 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 SRGAP2BP0DMP2 458 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 PTPN1P18031 435 aaKnown RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 EEF1GP26641 437 aaKnown RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 ACSL1P33121 698 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 HPCAL1P37235 193 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 CD86P42081 329 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 CASP3P42574 277 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 MRPS9P82933 396 aaKnown RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 DUSP4Q13115 394 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 IKZF1Q13422 519 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 RIN1Q13671 783 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 NCOA4Q13772 614 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 FRG1Q14331 258 aaKnown RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 MFSD13AQ14CX5 517 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 INO80DQ53TQ3 878 aaPredicted RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 RCOR2Q8IZ40 523 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 JDP2Q8WYK2 163 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 FIG4Q92562 907 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 ATP2A3Q93084 1043 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 CMTM3Q96MX0 182 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 PANX3Q96QZ0 392 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 NAPBQ9H115 298 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 LIN28AQ9H9Z2 209 aaKnown RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 HMG20AQ9NP66 347 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 DBNLQ9UJU6 430 aaKnown RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 PCDHA4Q9UN74 947 aa9.08□□□□□ -0.96
COMMD3-215ENST00000602574 FARP1Q9Y4F1 1045 aaPredicted RBP9.08□□□□□ -0.96
COMMD3-215ENST00000602574 CORINQ9Y5Q5 1042 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms