RNA–Protein interactions for RNA: ENST00000601392.5

CELF4-222, Transcript of CUGBP Elav-like family member 4, human

TSL 1 (best)

Gene CELF4, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-222	ENST00000601392	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
CELF4-222	ENST00000601392	NUMBL	Q9Y6R0	609 aa		13.21	□□□□□ -0.29
CELF4-222	ENST00000601392	SLC12A8	A0AV02	714 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	PDE2A	O00408	941 aa	Predicted RBP	13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	NARS	O43776	548 aa	Known RBP	13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	TBX18	O95935	607 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	PDGFB	P01127	241 aa	Predicted RBP	13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	APOE	P02649	317 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	SRF	P11831	508 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	ARL4A	P40617	200 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	DPYSL3	Q14195	570 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	KRT81	Q14533	505 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	CYP1B1	Q16678	543 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	SMTNL2	Q2TAL5	461 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	ARHGAP15	Q53QZ3	475 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	CCDC50	Q8IVM0	306 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	NPAS3	Q8IXF0	933 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	HS6ST3	Q8IZP7	471 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	SLC44A3	Q8N4M1	653 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	MMGT1	Q8N4V1	131 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	KIAA1958	Q8N8K9	716 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	HSPH1	Q92598	858 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	MS4A14	Q96JA4	679 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	CAPZA3	Q96KX2	299 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	RUNDC3B	Q96NL0	473 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	CARD6	Q9BX69	1037 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	KLF16	Q9BXK1	252 aa	Predicted RBP	13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	MAK16	Q9BXY0	300 aa	Known RBP	13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	DCLK3	Q9C098	648 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	RNF38	Q9H0F5	515 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	DHX35	Q9H5Z1	703 aa	Known RBP	13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	TASP1	Q9H6P5	420 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	STOML2	Q9UJZ1	356 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	NUDT5	Q9UKK9	219 aa		13.2	□□□□□ -0.3
CELF4-222	ENST00000601392	GREB1	Q4ZG55	1949 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	GOLGA6L10	A0A0M3HER8	536 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	EFCAB8	A8MWE9	144 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	ANHX	E9PGG2	379 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392		H3BRJ5	948 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392		I6L893	689 aa	Predicted RBP	13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	STK25	O00506	426 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	KRIT1	O00522	736 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	MYL4	P12829	197 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	TCF3	P15923	654 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	CEBPB	P17676	345 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	HDC	P19113	662 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	GJC1	P36383	396 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	VCP	P55072	806 aa	Known RBP	13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	CCNG2	Q16589	344 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	CA9	Q16790	459 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	SLC5A9	Q2M3M2	681 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	ANKRD20A8P	Q5CZ79	823 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	PRSS36	Q5K4E3	855 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	SLC9A4	Q6AI14	798 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	PARM1	Q6UWI2	310 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	SIX5	Q8N196	739 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	C12orf50	Q8NA57	414 aa	Predicted RBP	13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	PRRX2	Q99811	253 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	CALN1	Q9BXU9	219 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	NACA2	Q9H009	215 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	ATXN3L	Q9H3M9	355 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	LRRC19	Q9H756	370 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	ANLN	Q9NQW6	1124 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	DONSON	Q9NYP3	566 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	GDE1	Q9NZC3	331 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	CWC15	Q9P013	229 aa	Known RBP	13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	OR12D3	Q9UGF7	316 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	RASAL2	Q9UJF2	1139 aa		13.19	□□□□□ -0.3
CELF4-222	ENST00000601392	NOTCH4	Q99466	2003 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	TRAV19	A0A0A6YYK7	116 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	C2orf78	A6NCI8	922 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	MSI1	O43347	362 aa	Known RBP	13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	MOSPD3	O75425	235 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	HOXC13	P31276	330 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	SLC11A2	P49281	568 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	HARS2	P49590	506 aa	Known RBP	13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	SIX1	Q15475	284 aa	Predicted RBP	13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	C5orf22	Q49AR2	442 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	GLE1	Q53GS7	698 aa	Known RBP	13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	MANEAL	Q5VSG8	457 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	TXNDC8	Q6A555	127 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	AADACL2	Q6P093	401 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	BZW1	Q7L1Q6	419 aa	Known RBP	13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	ANKS1B	Q7Z6G8	1248 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	MIB1	Q86YT6	1006 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	SHKBP1	Q8TBC3	707 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	FGF14	Q92915	247 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	CSPG4P5	Q96PW8	444 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	KCTD15	Q96SI1	283 aa	Predicted RBP	13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	EPAS1	Q99814	870 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	DDX50	Q9BQ39	737 aa	Known RBP	13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	KXD1	Q9BQD3	176 aa		13.18	□□□□□ -0.3
CELF4-222	ENST00000601392	SLC46A2	Q9BY10	475 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms