RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 SLC24A3Q9HC58 644 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 SLC7A8Q9UHI5 535 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 GLRA3O75311 464 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 ITGA2BP08514 1039 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 ERVK-10P10266 1014 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 PGAM1P18669 254 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 MRPS35P82673 323 aaKnown RBP20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 ADIGQ0VDE8 80 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 TUBB3Q13509 450 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 WDR75Q8IWA0 830 aaKnown RBP20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 SHCBP1Q8NEM2 672 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 SHKBP1Q8TBC3 707 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 PGBD4Q96DM1 585 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 CDCA5Q96FF9 252 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 SGIP1Q9BQI5 828 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 SYT15Q9BQS2 421 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 KATNBL1Q9H079 304 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 KPNA7A9QM74 516 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 CREB3O43889 395 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 PRKCGP05129 697 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 C6orf222P0C671 652 aaPredicted RBP20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 SCNN1AP37088 669 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 MLH1P40692 756 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 PDE1BQ01064 536 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 SLC25A52Q3SY17 297 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 OTUD1Q5VV17 481 aaPredicted RBP20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 ALKAL1Q6UXT8 129 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 C10orf107Q8IVU9 208 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 KBTBD2Q8IY47 623 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 ACMSDQ8TDX5 336 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 RNF139Q8WU17 664 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 SNX25Q9H3E2 840 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 KRT82Q9NSB4 513 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 LRCH1Q9Y2L9 728 aa20.79■□□□□ 0.92
SHKBP1-225ENST00000600733 DICER1Q9UPY3 1922 aaKnown RBP20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 OPHN1O60890 802 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 F7P08709 466 aaPredicted RBP20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 ARRB2P32121 409 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 STXBP5Q5T5C0 1151 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 NET1Q7Z628 596 aaPredicted RBP20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 PIGZQ86VD9 579 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 HACE1Q8IYU2 909 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 NME8Q8N427 588 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 SLC25A41Q8N5S1 370 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 PRDM12Q9H4Q4 367 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 ZNF212Q9UDV6 495 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 F8W8V4 182 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 PIRO00625 290 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 SNAI1O95863 264 aaPredicted RBP20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 MMP3P08254 477 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 GJA5P36382 358 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 ACADSBP45954 432 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 GTF2A2P52657 109 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 DNAL1Q4LDG9 190 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 EFHC1Q5JVL4 640 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 NOTUMQ6P988 496 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 TMEM154Q6P9G4 183 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 MAVSQ7Z434 540 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 RASSF3Q86WH2 238 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 ZNF567Q8N184 647 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 ATP2A3Q93084 1043 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 HSFY1Q96LI6 401 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 EIF2B3Q9NR50 452 aaKnown RBP20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 ZNF358Q9NW07 568 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 TMEM216Q9P0N5 145 aa20.78■□□□□ 0.92
SHKBP1-225ENST00000600733 RBM47A0AV96 593 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-225ENST00000600733 GPR32O75388 356 aa20.77■□□□□ 0.92
SHKBP1-225ENST00000600733 CIB2O75838 187 aa20.77■□□□□ 0.92
SHKBP1-225ENST00000600733 STK10O94804 968 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-225ENST00000600733 SMPD1P17405 629 aa20.77■□□□□ 0.92
SHKBP1-225ENST00000600733 AOC1P19801 751 aa20.77■□□□□ 0.92
SHKBP1-225ENST00000600733 CPOXP36551 454 aa20.77■□□□□ 0.92
SHKBP1-225ENST00000600733 TBCCQ15814 346 aa20.77■□□□□ 0.92
SHKBP1-225ENST00000600733 POU5F2Q8N7G0 328 aa20.77■□□□□ 0.92
SHKBP1-225ENST00000600733 PNPOQ9NVS9 261 aa20.77■□□□□ 0.92
SHKBP1-225ENST00000600733 UBQLN1Q9UMX0 589 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-225ENST00000600733 SMIM28A0A1B0GU29 152 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 KCNK1O00180 336 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 CLDN5O00501 218 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 BEST1O76090 585 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 SKIP12755 728 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 NDUFV1P49821 464 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 CCNHP51946 323 aaPredicted RBP20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 ACTR3P61158 418 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 NME3Q13232 169 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 TRMT5Q32P41 509 aaKnown RBP20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 RABGAP1LQ5R372 815 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 C1orf146Q5VVC0 180 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 CMC1Q7Z7K0 106 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 PPFIBP2Q8ND30 876 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 APPL2Q8NEU8 664 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 ATXN7L3BQ96GX2 97 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 SORT1Q99523 831 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 YIPF3Q9GZM5 350 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 RCOR3Q9P2K3 495 aaPredicted RBP20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 DCDC2Q9UHG0 476 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 RPS6KL1Q9Y6S9 549 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 PLXNB2O15031 1838 aa20.76■□□□□ 0.91
SHKBP1-225ENST00000600733 ADCY6O43306 1168 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms