RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 RHOQP17081 205 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 PTPN7P35236 360 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 ETFBP38117 255 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 MAPKAPK2P49137 400 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 CDH4P55283 916 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 RUNX3Q13761 415 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 DHCR24Q15392 516 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 RPS6KA1Q15418 735 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 PPP2R5EQ16537 467 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 TAZQ16635 292 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 ODF2Q5BJF6 829 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 NUDT18Q6ZVK8 323 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 SETD3Q86TU7 594 aaPredicted RBP12.69□□□□□ -0.38
TGFB1-204ENST00000600196 ZSCAN30Q86W11 494 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 ZNF683Q8IZ20 524 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 CCDC185Q8N715 623 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 KCTD6Q8NC69 237 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 FAF2Q96CS3 445 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 TBC1D31Q96DN5 1066 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 XPO6Q96QU8 1125 aaKnown RBP12.69□□□□□ -0.38
TGFB1-204ENST00000600196 SNRNP25Q9BV90 132 aaKnown RBP12.69□□□□□ -0.38
TGFB1-204ENST00000600196 CARD9Q9H257 536 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 BRD9Q9H8M2 597 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 COX16Q9P0S2 106 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 WNT16Q9UBV4 365 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 TRIM10Q9UDY6 481 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 PCSK1NQ9UHG2 260 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 TFR2Q9UP52 801 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 SORCS3Q9UPU3 1222 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 RAD54BQ9Y620 910 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 CAPN6Q9Y6Q1 641 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 A0A0A0MRY4 1105 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 A0A1B0GVM2 712 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 TCAF2A6NFQ2 919 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 E9PAM4 449 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 TIMM44O43615 452 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 IRF1P10914 325 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 KDELR1P24390 212 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 IL1R2P27930 398 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 SSR1P43307 286 aaKnown RBP12.68□□□□□ -0.38
TGFB1-204ENST00000600196 ATXN1P54253 815 aaKnown RBP12.68□□□□□ -0.38
TGFB1-204ENST00000600196 YBEYP58557 167 aaPredicted RBP12.68□□□□□ -0.38
TGFB1-204ENST00000600196 TAS2R40P59535 323 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 ETF1P62495 437 aaKnown RBP12.68□□□□□ -0.38
TGFB1-204ENST00000600196 TFDP2Q14188 446 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 DMC1Q14565 340 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 NADSYN1Q6IA69 706 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 FBXL22Q6P050 247 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 RHBDF2Q6PJF5 856 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 BZW1Q7L1Q6 419 aaKnown RBP12.68□□□□□ -0.38
TGFB1-204ENST00000600196 RALGPS2Q86X27 583 aaPredicted RBP12.68□□□□□ -0.38
TGFB1-204ENST00000600196 CHSY1Q86X52 802 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 FIBINQ8TAL6 211 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 CSGALNACT1Q8TDX6 532 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 TSC1Q92574 1164 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 PEBP4Q96S96 227 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 PLA2G2FQ9BZM2 168 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 ZYG11BQ9C0D3 744 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 SMG9Q9H0W8 520 aaKnown RBP12.68□□□□□ -0.38
TGFB1-204ENST00000600196 DHX35Q9H5Z1 703 aaKnown RBP12.68□□□□□ -0.38
TGFB1-204ENST00000600196 ECT2Q9H8V3 914 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 PRDM6Q9NQX0 595 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 TMEM248Q9NWD8 314 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 TRMT1Q9NXH9 659 aaKnown RBP12.68□□□□□ -0.38
TGFB1-204ENST00000600196 DUSP12Q9UNI6 340 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 TBC1D30Q9Y2I9 924 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 SLC27A6Q9Y2P4 619 aa12.68□□□□□ -0.38
TGFB1-204ENST00000600196 I6L893 689 aaPredicted RBP12.67□□□□□ -0.38
TGFB1-204ENST00000600196 MAN2B1O00754 1011 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 CACNG3O60359 315 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 LRIG2O94898 1065 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 MOCS2O96007 188 aaPredicted RBP12.67□□□□□ -0.38
TGFB1-204ENST00000600196 GDI1P31150 447 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 PLK1P53350 603 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 PRKCQQ04759 706 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 ZNF33AQ06730 810 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 TUBB2AQ13885 445 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 KRT81Q14533 505 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 ZNF569Q5MCW4 686 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 C6orf118Q5T5N4 469 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 FYB2Q5VWT5 728 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 RAP1GAP2Q684P5 730 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 GJD3Q8N144 294 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 SHDQ96IW2 340 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 PBKQ96KB5 322 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 RPRD1AQ96P16 312 aaPredicted RBP12.67□□□□□ -0.38
TGFB1-204ENST00000600196 NELL2Q99435 816 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 KXD1Q9BQD3 176 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 TUBB2BQ9BVA1 445 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 LINC00597Q9H2U6 94 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 PCDH18Q9HCL0 1135 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 ANLNQ9NQW6 1124 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.67□□□□□ -0.38
TGFB1-204ENST00000600196 RNF14Q9UBS8 474 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 REV3LO60673 3130 aa12.67□□□□□ -0.38
TGFB1-204ENST00000600196 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.66□□□□□ -0.38
TGFB1-204ENST00000600196 A0A0U1RQJ8 604 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 FAM170AA1A519 330 aa12.66□□□□□ -0.38
TGFB1-204ENST00000600196 ILVBLA1L0T0 632 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms