RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 O00370 1275 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 TNFSF14O43557 240 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 PCDHGA12O60330 932 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 ASLP04424 464 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 DAOAP59103 153 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 RPS14P62263 151 aaKnown RBP17.69■□□□□ 0.42
PNKP-210ENST00000597965 LRRC63Q05C16 580 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 KIF19Q2TAC6 998 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 CBWD6Q4V339 395 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 CBWD3Q5JTY5 395 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 CBWD5Q5RIA9 395 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 LCLAT1Q6UWP7 414 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 KDM1BQ8NB78 822 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 BIRC7Q96CA5 298 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 GSDMAQ96QA5 445 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 TRIM62Q9BVG3 475 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 METTL14Q9HCE5 456 aaKnown RBP17.69■□□□□ 0.42
PNKP-210ENST00000597965 TM9SF3Q9HD45 589 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 PRSS16Q9NQE7 514 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 HOOK1Q9UJC3 728 aaKnown RBP17.69■□□□□ 0.42
PNKP-210ENST00000597965 TPX2Q9ULW0 747 aaKnown RBP17.69■□□□□ 0.42
PNKP-210ENST00000597965 BAHCC1Q9P281 2608 aa17.69■□□□□ 0.42
PNKP-210ENST00000597965 TULP2O00295 520 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 SART1O43290 800 aaKnown RBP17.68■□□□□ 0.42
PNKP-210ENST00000597965 TBL1XO60907 577 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 DKK1O94907 266 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 FBXO21O94952 628 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 FSBPO95073 299 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 SMC2O95347 1197 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 CDK4P11802 303 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 LCP1P13796 627 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 C21orf59P57076 290 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 BNC1Q01954 994 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 PTPRNQ16849 979 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 ZNF658Q5TYW1 1059 aaPredicted RBP17.68■□□□□ 0.42
PNKP-210ENST00000597965 PIK3R6Q5UE93 754 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 MFN1Q8IWA4 741 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 HJURPQ8NCD3 748 aaPredicted RBP17.68■□□□□ 0.42
PNKP-210ENST00000597965 UBA3Q8TBC4 463 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 HSFY1Q96LI6 401 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 ACE2Q9BYF1 805 aaPredicted RBP17.68■□□□□ 0.42
PNKP-210ENST00000597965 SNX11Q9Y5W9 270 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 CABIN1Q9Y6J0 2220 aa17.68■□□□□ 0.42
PNKP-210ENST00000597965 ACACAQ13085 2346 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 ADAMTS20P59510 1910 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 E9PAM4 449 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 MOCS3O95396 460 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 IGLV3-27P01718 113 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 PRCPP42785 496 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 TBX4P57082 545 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 RACK1P63244 317 aaKnown RBP17.67■□□□□ 0.42
PNKP-210ENST00000597965 STIM1Q13586 685 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 CNGA2Q16280 664 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 PKDCCQ504Y2 493 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 SMYD4Q8IYR2 804 aaPredicted RBP17.67■□□□□ 0.42
PNKP-210ENST00000597965 FIBINQ8TAL6 211 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 GANCQ8TET4 914 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 SLC35F5Q8WV83 523 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 NDRG1Q92597 394 aaKnown RBP17.67■□□□□ 0.42
PNKP-210ENST00000597965 SERPINB11Q96P15 392 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 RSPH9Q9H1X1 276 aaPredicted RBP17.67■□□□□ 0.42
PNKP-210ENST00000597965 SCUBE2Q9NQ36 999 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 PTPRBP23467 1997 aa17.67■□□□□ 0.42
PNKP-210ENST00000597965 PLXNB3Q9ULL4 1909 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 KNL1Q8NG31 2342 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 GOLGA6L4A6NEF3 574 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 LRRC72A6NJI9 287 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 PMM2O15305 246 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 PAPSS1O43252 624 aaPredicted RBP17.66■□□□□ 0.42
PNKP-210ENST00000597965 MSI1O43347 362 aaKnown RBP17.66■□□□□ 0.42
PNKP-210ENST00000597965 ACSL4O60488 711 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 LTFP02788 710 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 ATXN1LP0C7T5 689 aaKnown RBP17.66■□□□□ 0.42
PNKP-210ENST00000597965 PPP1R2P41236 205 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 NNTQ13423 1086 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 CDH18Q13634 790 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 ARID5BQ14865 1188 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 KIAA0895LQ68EN5 471 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 TMEM270Q6UE05 265 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 ZC3H3Q8IXZ2 948 aaKnown RBP17.66■□□□□ 0.42
PNKP-210ENST00000597965 ZNF366Q8N895 744 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 TTC17Q96AE7 1141 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 NT5C1BQ96P26 610 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 PABPC3Q9H361 631 aaKnown RBP17.66■□□□□ 0.42
PNKP-210ENST00000597965 TOR4AQ9NXH8 423 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 FBXL12Q9NXK8 326 aa17.66■□□□□ 0.42
PNKP-210ENST00000597965 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.66■□□□□ 0.42
PNKP-210ENST00000597965 MUC22E2RYF6 1773 aaPredicted RBP17.66■□□□□ 0.42
PNKP-210ENST00000597965 NUMA1Q14980 2115 aa17.65■□□□□ 0.42
PNKP-210ENST00000597965 TARSL2A2RTX5 802 aaKnown RBP17.65■□□□□ 0.42
PNKP-210ENST00000597965 VILLO15195 856 aa17.65■□□□□ 0.42
PNKP-210ENST00000597965 YKT6O15498 198 aa17.65■□□□□ 0.42
PNKP-210ENST00000597965 SRPRAP08240 638 aaKnown RBP17.65■□□□□ 0.42
PNKP-210ENST00000597965 CD70P32970 193 aa17.65■□□□□ 0.42
PNKP-210ENST00000597965 HNRNPA1L2Q32P51 320 aaKnown RBP17.65■□□□□ 0.42
PNKP-210ENST00000597965 RFWD3Q6PCD5 774 aa17.65■□□□□ 0.42
PNKP-210ENST00000597965 PDCD7Q8N8D1 485 aaKnown RBP17.65■□□□□ 0.42
PNKP-210ENST00000597965 MDM1Q8TC05 714 aa17.65■□□□□ 0.42
PNKP-210ENST00000597965 SLC35C1Q96A29 364 aa17.65■□□□□ 0.42
PNKP-210ENST00000597965 OMDQ99983 421 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms