RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 CEP63Q96MT8 703 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 METTL14Q9HCE5 456 aaKnown RBP10.95□□□□□ -0.66
LSM4-205ENST00000597776 PRSS16Q9NQE7 514 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 PCOLCE2Q9UKZ9 415 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.95□□□□□ -0.66
LSM4-205ENST00000597776 DSPP15924 2871 aaKnown RBP10.95□□□□□ -0.66
LSM4-205ENST00000597776 PKD1L2Q7Z442 2459 aa10.95□□□□□ -0.66
LSM4-205ENST00000597776 NUMA1Q14980 2115 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 ZFYVE26Q68DK2 2539 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 ACSL4O60488 711 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 SEMA4FO95754 770 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 CER1O95813 267 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 FYNP06241 537 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 ATP5BP06576 529 aaKnown RBP10.94□□□□□ -0.66
LSM4-205ENST00000597776 POLR2EP19388 210 aaKnown RBP10.94□□□□□ -0.66
LSM4-205ENST00000597776 BMP6P22004 513 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 RPS24P62847 133 aaKnown RBP10.94□□□□□ -0.66
LSM4-205ENST00000597776 STIM1Q13586 685 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 NUGGCQ68CJ6 796 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 MMS22LQ6ZRQ5 1243 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 SLCO6A1Q86UG4 719 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 MFN1Q8IWA4 741 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 UNC45BQ8IWX7 931 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 SCUBE3Q8IX30 993 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 ADAM32Q8TC27 787 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 DQX1Q8TE96 717 aaKnown RBP10.94□□□□□ -0.66
LSM4-205ENST00000597776 ADAMTS14Q8WXS8 1223 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 GOLGA1Q92805 767 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 DHTKD1Q96HY7 919 aaPredicted RBP10.94□□□□□ -0.66
LSM4-205ENST00000597776 LMLNQ96KR4 655 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 FCRL2Q96LA5 508 aaPredicted RBP10.94□□□□□ -0.66
LSM4-205ENST00000597776 KREMEN1Q96MU8 473 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 NUCKS1Q9H1E3 243 aaKnown RBP10.94□□□□□ -0.66
LSM4-205ENST00000597776 PCED1AQ9H1Q7 454 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 TM9SF3Q9HD45 589 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 TM7SF3Q9NS93 570 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 HOOK1Q9UJC3 728 aaKnown RBP10.94□□□□□ -0.66
LSM4-205ENST00000597776 CTNND2Q9UQB3 1225 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 NAALADL1Q9UQQ1 740 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 BTBD3Q9Y2F9 522 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 FAM208BQ5VWN6 2430 aa10.94□□□□□ -0.66
LSM4-205ENST00000597776 NBEAQ8NFP9 2946 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 FAM221BA6H8Z2 402 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 PPP1R3GB7ZBB8 358 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 TAF4O00268 1085 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 KCNK3O14649 394 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 PMM2O15305 246 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 IRAK2O43187 625 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 FBXO21O94952 628 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 FSBPO95073 299 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 MOCS2O96007 188 aaPredicted RBP10.93□□□□□ -0.66
LSM4-205ENST00000597776 DNTTP04053 509 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 CSKP41240 450 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 AFF3P51826 1226 aaKnown RBP10.93□□□□□ -0.66
LSM4-205ENST00000597776 RING1Q06587 406 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 STILQ15468 1287 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 KIF19Q2TAC6 998 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 FSCBQ5H9T9 825 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 KCNT1Q5JUK3 1230 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 MPP7Q5T2T1 576 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 ZNF776Q68DI1 518 aaPredicted RBP10.93□□□□□ -0.66
LSM4-205ENST00000597776 DENND1BQ6P3S1 775 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 IL27RAQ6UWB1 636 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 TAC4Q86UU9 113 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 CFAP52Q8N1V2 620 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 CARNMT1Q8N4J0 409 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 HJURPQ8NCD3 748 aaPredicted RBP10.93□□□□□ -0.66
LSM4-205ENST00000597776 NELFBQ8WX92 580 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 FAM149B1Q96BN6 582 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 BIRC7Q96CA5 298 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 MYO19Q96H55 970 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 HSFY1Q96LI6 401 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 TIGD1Q96MW7 591 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 GTPBP4Q9BZE4 634 aaKnown RBP10.93□□□□□ -0.66
LSM4-205ENST00000597776 BTBD1Q9H0C5 482 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 ST7Q9NRC1 585 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 XPO7Q9UIA9 1087 aaKnown RBP10.93□□□□□ -0.66
LSM4-205ENST00000597776 INTS6Q9UL03 887 aaKnown RBP10.93□□□□□ -0.66
LSM4-205ENST00000597776 SNX11Q9Y5W9 270 aa10.93□□□□□ -0.66
LSM4-205ENST00000597776 LAMA5O15230 3695 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 ITPR1Q14643 2758 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 FAM47DPA6NHR8 397 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 GOLGA8CPA6NN73 597 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 BIN1O00499 593 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 SIN3BO75182 1162 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 CAPNS1P04632 268 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 ZNF883P0CG24 379 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 C7P10643 843 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 KRT5P13647 590 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 HOXB3P14651 431 aaPredicted RBP10.92□□□□□ -0.66
LSM4-205ENST00000597776 CTSOP43234 321 aaPredicted RBP10.92□□□□□ -0.66
LSM4-205ENST00000597776 NUMBP49757 651 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 STX17P56962 302 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 GCNT1Q02742 428 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 ZBTB16Q05516 673 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 SCAPQ12770 1279 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 CETN1Q12798 172 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 KCNH2Q12809 1159 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 CDH18Q13634 790 aa10.92□□□□□ -0.66
LSM4-205ENST00000597776 TTC31Q49AM3 519 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms