RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 RNF10Q8N5U6 811 aaKnown RBP13.45□□□□□ -0.26
SCAF1-202ENST00000595242 TRIM58Q8NG06 486 aa13.45□□□□□ -0.26
SCAF1-202ENST00000595242 MRGPRX1Q96LB2 322 aa13.45□□□□□ -0.26
SCAF1-202ENST00000595242 ACOX2Q99424 681 aa13.45□□□□□ -0.26
SCAF1-202ENST00000595242 CARD6Q9BX69 1037 aa13.45□□□□□ -0.26
SCAF1-202ENST00000595242 PCIF1Q9H4Z3 704 aa13.45□□□□□ -0.26
SCAF1-202ENST00000595242 ASB7Q9H672 318 aa13.45□□□□□ -0.26
SCAF1-202ENST00000595242 KIAA1586Q9HCI6 787 aa13.45□□□□□ -0.26
SCAF1-202ENST00000595242 TRPM5Q9NZQ8 1165 aa13.45□□□□□ -0.26
SCAF1-202ENST00000595242 DEC1Q9P2X7 70 aa13.45□□□□□ -0.26
SCAF1-202ENST00000595242 COQ4Q9Y3A0 265 aa13.45□□□□□ -0.26
SCAF1-202ENST00000595242 STARD13Q9Y3M8 1113 aa13.45□□□□□ -0.26
SCAF1-202ENST00000595242 C2CD2Q9Y426 696 aa13.45□□□□□ -0.26
SCAF1-202ENST00000595242 F8VZ95 297 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 BCAT2O15382 392 aaPredicted RBP13.44□□□□□ -0.26
SCAF1-202ENST00000595242 NCAM1P13591 858 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 SOX5P35711 763 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 ACOT2P49753 483 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 USP46P62068 366 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 TUBB4BP68371 445 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 DLG4P78352 724 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 CETN1Q12798 172 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 MYO1EQ12965 1108 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 SNRNP35Q16560 246 aaKnown RBP13.44□□□□□ -0.26
SCAF1-202ENST00000595242 BTBD8Q5XKL5 378 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 EGFLAMQ63HQ2 1017 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 RSRC2Q7L4I2 434 aaKnown RBP13.44□□□□□ -0.26
SCAF1-202ENST00000595242 TRAPPC11Q7Z392 1133 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 TMPRSS12Q86WS5 348 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 GPD1LQ8N335 351 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 CEP112Q8N8E3 955 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 TERB1Q8NA31 727 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 LRRN4CLQ8ND94 238 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 MNS1Q8NEH6 495 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 PARD3BQ8TEW8 1205 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 HNRNPABQ99729 332 aaKnown RBP13.44□□□□□ -0.26
SCAF1-202ENST00000595242 SYT11Q9BT88 431 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 TBC1D14Q9P2M4 693 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 DNMT3LQ9UJW3 386 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 DNAJC12Q9UKB3 198 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 RAD54BQ9Y620 910 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 AK5Q9Y6K8 562 aa13.44□□□□□ -0.26
SCAF1-202ENST00000595242 A0A087X0T9 212 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 ZNF840PA6NDX5 716 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 ERVH48-1M5A8F1 160 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 OLFM2O95897 454 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 FAM228BP0C875 321 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 MXI1P50539 228 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 CLDN10P78369 228 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 PTK2Q05397 1052 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 CYP24A1Q07973 514 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 TAF1BQ53T94 588 aaPredicted RBP13.43□□□□□ -0.26
SCAF1-202ENST00000595242 C6orf118Q5T5N4 469 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 DCAF12L1Q5VU92 463 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 KIAA1324Q6UXG2 1013 aaKnown RBP13.43□□□□□ -0.26
SCAF1-202ENST00000595242 ZNF571Q7Z3V5 609 aaPredicted RBP13.43□□□□□ -0.26
SCAF1-202ENST00000595242 CBWD2Q8IUF1 395 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 FAM181AQ8N9Y4 354 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 ZSWIM2Q8NEG5 633 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 CADM4Q8NFZ8 388 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 TOE1Q96GM8 510 aaKnown RBP13.43□□□□□ -0.26
SCAF1-202ENST00000595242 FUBP3Q96I24 572 aaKnown RBP eCLIP13.43□□□□□ -0.26
SCAF1-202ENST00000595242 SPATA17Q96L03 361 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 ZNF560Q96MR9 790 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 GABRG3Q99928 467 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 GPR174Q9BXC1 333 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 TMEM8AQ9HCN3 771 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 INTUQ9ULD6 942 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 L1RE1Q9UN81 338 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 COL5A1P20908 1838 aaPredicted RBP13.43□□□□□ -0.26
SCAF1-202ENST00000595242 UNC79Q9P2D8 2635 aa13.43□□□□□ -0.26
SCAF1-202ENST00000595242 CKAP5Q14008 2032 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 DOPEY2Q9Y3R5 2298 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 LRRIQ3A6PVS8 624 aaPredicted RBP13.42□□□□□ -0.26
SCAF1-202ENST00000595242 TRIM24O15164 1050 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 HCRTO43612 131 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 HUS1O60921 280 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 TACC1O75410 805 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 CCDC172P0C7W6 258 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 MBL2P11226 248 aaPredicted RBP13.42□□□□□ -0.26
SCAF1-202ENST00000595242 JUPP14923 745 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 PRLRP16471 622 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 PNPLA4P41247 253 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 MAGEA11P43364 429 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 PPP3CCP48454 512 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 CXADRP78310 365 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 DRAP1Q14919 205 aaPredicted RBP13.42□□□□□ -0.26
SCAF1-202ENST00000595242 ANO4Q32M45 955 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 SLFN12LQ6IEE8 588 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 GJB7Q6PEY0 223 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 DENND5BQ6ZUT9 1274 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 DDX42Q86XP3 938 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCAF1-202ENST00000595242 TMEM86AQ8N2M4 240 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 SLC30A5Q8TAD4 765 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 WSB2Q9NYS7 404 aaPredicted RBP13.42□□□□□ -0.26
SCAF1-202ENST00000595242 GMIPQ9P107 970 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 EIF2B4Q9UI10 523 aaKnown RBP13.42□□□□□ -0.26
SCAF1-202ENST00000595242 TFR2Q9UP52 801 aa13.42□□□□□ -0.26
SCAF1-202ENST00000595242 A0A1B0GVT2 93 aa13.41□□□□□ -0.26
SCAF1-202ENST00000595242 E2F8A0AVK6 867 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms