RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 PNPOQ9NVS9 261 aa13.61□□□□□ -0.23
VRK3-209ENST00000594948 H3BNX3 289 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 DENRO43583 198 aaKnown RBP13.6□□□□□ -0.23
VRK3-209ENST00000594948 HBP1O60381 514 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 OPHN1O60890 802 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 GRAP2O75791 330 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 STK10O94804 968 aaKnown RBP13.6□□□□□ -0.23
VRK3-209ENST00000594948 EGFRP00533 1210 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 COX4I1P13073 169 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 KCNA4P22459 653 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 PHKA2P46019 1235 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 CHN2P52757 468 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 EPHB1P54762 984 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 PRKG1Q13976 671 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 PPP6R3Q5H9R7 873 aaPredicted RBP13.6□□□□□ -0.23
VRK3-209ENST00000594948 NCBP2-AS2Q69YL0 99 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 PMF1Q6P1K2 205 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 UGT2A3Q6UWM9 527 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 LBX2Q6XYB7 198 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 PSTKQ8IV42 348 aaKnown RBP13.6□□□□□ -0.23
VRK3-209ENST00000594948 DEFB107AQ8IZN7 70 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 MARVELD2Q8N4S9 558 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 POU5F2Q8N7G0 328 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 CATSPER1Q8NEC5 780 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 NAT14Q8WUY8 206 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 SLC35F5Q8WV83 523 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 ARNTL2Q8WYA1 636 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 MPHOSPH6Q99547 160 aaKnown RBP13.6□□□□□ -0.23
VRK3-209ENST00000594948 CPNE1Q99829 537 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 PLK2Q9NYY3 685 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 PPP1R1BQ9UD71 204 aaPredicted RBP13.6□□□□□ -0.23
VRK3-209ENST00000594948 BCAP29Q9UHQ4 241 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 VPS28Q9UK41 221 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 PSMD13Q9UNM6 376 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 PDCD11Q14690 1871 aaKnown RBP13.6□□□□□ -0.23
VRK3-209ENST00000594948 PAPSS1O43252 624 aaPredicted RBP13.6□□□□□ -0.23
VRK3-209ENST00000594948 TOP3BO95985 862 aaKnown RBP13.6□□□□□ -0.23
VRK3-209ENST00000594948 CPA3P15088 417 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 PEX2P28328 305 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 GRIA1P42261 906 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 AQP4P55087 323 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 TBL3Q12788 808 aaKnown RBP13.6□□□□□ -0.23
VRK3-209ENST00000594948 KLF10Q13118 480 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 PDK3Q15120 406 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 SLC10A6Q3KNW5 377 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 MMEL1Q495T6 779 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 CELF3Q5SZQ8 465 aaKnown RBP13.6□□□□□ -0.23
VRK3-209ENST00000594948 LPCAT4Q643R3 524 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 SLC26A9Q7LBE3 791 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 ICA1LQ8NDH6 482 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 SREK1Q8WXA9 508 aaKnown RBP13.6□□□□□ -0.23
VRK3-209ENST00000594948 CSPG4P5Q96PW8 444 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 MMP19Q99542 508 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 SERPINI1Q99574 410 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 FERMT1Q9BQL6 677 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 CDH19Q9H159 772 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 Q9H521 79 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 PDZD7Q9H5P4 517 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 DHX35Q9H5Z1 703 aaKnown RBP13.6□□□□□ -0.23
VRK3-209ENST00000594948 MTMR10Q9NXD2 777 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 DTLQ9NZJ0 730 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 TMEM216Q9P0N5 145 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 MID2Q9UJV3 735 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 AP4E1Q9UPM8 1137 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 USP3Q9Y6I4 520 aa13.6□□□□□ -0.23
VRK3-209ENST00000594948 ZNF638Q14966 1978 aaKnown RBP13.59□□□□□ -0.23
VRK3-209ENST00000594948 KPNA7A9QM74 516 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 PIK3R2O00459 728 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 PDE5AO76074 875 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 PENKP01210 267 aaPredicted RBP13.59□□□□□ -0.23
VRK3-209ENST00000594948 MPOP05164 745 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 VAV1P15498 845 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 RAG1P15918 1043 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 ADORA2AP29274 412 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 ADSLP30566 484 aaPredicted RBP13.59□□□□□ -0.23
VRK3-209ENST00000594948 RPL34P49207 117 aaKnown RBP13.59□□□□□ -0.23
VRK3-209ENST00000594948 GLUD2P49448 558 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 RGS7P49802 495 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 SERPINB8P50452 374 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 TRIP10Q15642 601 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 AMHR2Q16671 573 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 PPP1R26Q5T8A7 1209 aaPredicted RBP13.59□□□□□ -0.23
VRK3-209ENST00000594948 ARHGAP17Q68EM7 881 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 EFCAB12Q6NXP0 572 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 ZFP1Q6P2D0 407 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 FRMD7Q6ZUT3 714 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 DPH6Q7L8W6 267 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 STRADAQ7RTN6 431 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 ARHGAP22Q7Z5H3 698 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 SETD3Q86TU7 594 aaPredicted RBP13.59□□□□□ -0.23
VRK3-209ENST00000594948 TTC30AQ86WT1 665 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 CDR2LQ86X02 465 aaPredicted RBP13.59□□□□□ -0.23
VRK3-209ENST00000594948 COLGALT1Q8NBJ5 622 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 SHKBP1Q8TBC3 707 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 JDP2Q8WYK2 163 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 CNDP1Q96KN2 507 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 KCTD15Q96SI1 283 aaPredicted RBP13.59□□□□□ -0.23
VRK3-209ENST00000594948 SMARCAD1Q9H4L7 1026 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 MINDY3Q9H8M7 445 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 DPP3Q9NY33 737 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms