RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 TOE1Q96GM8 510 aaKnown RBP24.35■■□□□ 1.49
LSM4-204ENST00000594828 PRICKLE1Q96MT3 831 aaPredicted RBP24.35■■□□□ 1.49
LSM4-204ENST00000594828 NOX5Q96PH1 765 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 CPXM1Q96SM3 734 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 NUCKS1Q9H1E3 243 aaKnown RBP24.35■■□□□ 1.49
LSM4-204ENST00000594828 LMBRD1Q9NUN5 540 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 WSB2Q9NYS7 404 aaPredicted RBP24.35■■□□□ 1.49
LSM4-204ENST00000594828 KCNJ18B7U540 433 aa24.34■■□□□ 1.49
LSM4-204ENST00000594828 GLI1P08151 1106 aa24.34■■□□□ 1.49
LSM4-204ENST00000594828 SERPINF2P08697 491 aa24.34■■□□□ 1.49
LSM4-204ENST00000594828 ENGP17813 658 aa24.34■■□□□ 1.49
LSM4-204ENST00000594828 OXTRP30559 389 aa24.34■■□□□ 1.49
LSM4-204ENST00000594828 CLCN1P35523 988 aa24.34■■□□□ 1.49
LSM4-204ENST00000594828 MAPK8P45983 427 aa24.34■■□□□ 1.49
LSM4-204ENST00000594828 CAMK2GQ13555 558 aaPredicted RBP24.34■■□□□ 1.49
LSM4-204ENST00000594828 UAP1L1Q3KQV9 507 aa24.34■■□□□ 1.49
LSM4-204ENST00000594828 EFHC1Q5JVL4 640 aa24.34■■□□□ 1.49
LSM4-204ENST00000594828 SYCP2LQ5T4T6 812 aa24.34■■□□□ 1.49
LSM4-204ENST00000594828 N4BP2L1Q5TBK1 243 aaPredicted RBP24.34■■□□□ 1.49
LSM4-204ENST00000594828 CARNMT1Q8N4J0 409 aa24.34■■□□□ 1.49
LSM4-204ENST00000594828 OR2T3Q8NH03 318 aa24.34■■□□□ 1.49
LSM4-204ENST00000594828 MYEOVQ96EZ4 313 aa24.34■■□□□ 1.49
LSM4-204ENST00000594828 PES1O00541 588 aaKnown RBP24.33■■□□□ 1.49
LSM4-204ENST00000594828 IGLV3-25P01717 112 aa24.33■■□□□ 1.49
LSM4-204ENST00000594828 SNX16P57768 344 aa24.33■■□□□ 1.49
LSM4-204ENST00000594828 GFPT1Q06210 699 aaPredicted RBP24.33■■□□□ 1.49
LSM4-204ENST00000594828 KCNJ12Q14500 433 aa24.33■■□□□ 1.49
LSM4-204ENST00000594828 WDR45BQ5MNZ6 344 aa24.33■■□□□ 1.49
LSM4-204ENST00000594828 SLC47A2Q86VL8 602 aa24.33■■□□□ 1.49
LSM4-204ENST00000594828 FAM71AQ8IYT1 594 aa24.33■■□□□ 1.49
LSM4-204ENST00000594828 CFAP52Q8N1V2 620 aa24.33■■□□□ 1.49
LSM4-204ENST00000594828 ZNF366Q8N895 744 aa24.33■■□□□ 1.49
LSM4-204ENST00000594828 LMLNQ96KR4 655 aa24.33■■□□□ 1.49
LSM4-204ENST00000594828 BTN2A3PQ96KV6 586 aa24.33■■□□□ 1.49
LSM4-204ENST00000594828 GPR174Q9BXC1 333 aa24.33■■□□□ 1.49
LSM4-204ENST00000594828 SAMSN1Q9NSI8 373 aaKnown RBP24.33■■□□□ 1.49
LSM4-204ENST00000594828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.33■■□□□ 1.49
LSM4-204ENST00000594828 ASNSD1Q9NWL6 643 aa24.33■■□□□ 1.49
LSM4-204ENST00000594828 SLC12A6Q9UHW9 1150 aa24.33■■□□□ 1.49
LSM4-204ENST00000594828 XPO7Q9UIA9 1087 aaKnown RBP24.33■■□□□ 1.49
LSM4-204ENST00000594828 PNMA6AP0CW24 399 aaPredicted RBP24.32■■□□□ 1.48
LSM4-204ENST00000594828 NOVA1P51513 510 aaKnown RBP24.32■■□□□ 1.48
LSM4-204ENST00000594828 ATXN3P54252 364 aaPredicted RBP24.32■■□□□ 1.48
LSM4-204ENST00000594828 BPIFB4P59827 614 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 PITX1P78337 314 aaPredicted RBP24.32■■□□□ 1.48
LSM4-204ENST00000594828 CDK17Q00537 523 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 KCNMA1Q12791 1236 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 CDH18Q13634 790 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 OR6B2Q6IFH4 312 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 PSAPL1Q6NUJ1 521 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 DPY19L2P1Q6NXN4 242 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 C11orf57Q6ZUT1 292 aaPredicted RBP24.32■■□□□ 1.48
LSM4-204ENST00000594828 CACUL1Q86Y37 369 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 LGI2Q8N0V4 545 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 DEFB106AQ8N104 65 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 C1orf131Q8NDD1 294 aaKnown RBP24.32■■□□□ 1.48
LSM4-204ENST00000594828 NUP58Q9BVL2 599 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 CAPN10Q9HC96 672 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 FSCN3Q9NQT6 498 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 SUN2Q9UH99 717 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 CEP83Q9Y592 693 aa24.32■■□□□ 1.48
LSM4-204ENST00000594828 HSF2BPO75031 334 aa24.31■■□□□ 1.48
LSM4-204ENST00000594828 IGLV3-19P01714 112 aa24.31■■□□□ 1.48
LSM4-204ENST00000594828 EIF4EBP2Q13542 120 aaPredicted RBP24.31■■□□□ 1.48
LSM4-204ENST00000594828 DRAP1Q14919 205 aaPredicted RBP24.31■■□□□ 1.48
LSM4-204ENST00000594828 RAP1GAP2Q684P5 730 aa24.31■■□□□ 1.48
LSM4-204ENST00000594828 FAM183BPQ6ZVS7 135 aa24.31■■□□□ 1.48
LSM4-204ENST00000594828 CHSY1Q86X52 802 aa24.31■■□□□ 1.48
LSM4-204ENST00000594828 ATP6V0D2Q8N8Y2 350 aa24.31■■□□□ 1.48
LSM4-204ENST00000594828 CADM4Q8NFZ8 388 aa24.31■■□□□ 1.48
LSM4-204ENST00000594828 TTC17Q96AE7 1141 aa24.31■■□□□ 1.48
LSM4-204ENST00000594828 SLC2A13Q96QE2 648 aa24.31■■□□□ 1.48
LSM4-204ENST00000594828 FAM204AQ9H8W3 233 aa24.31■■□□□ 1.48
LSM4-204ENST00000594828 PRSS16Q9NQE7 514 aa24.31■■□□□ 1.48
LSM4-204ENST00000594828 SUSD2Q9UGT4 822 aa24.31■■□□□ 1.48
LSM4-204ENST00000594828 NCOR2Q9Y618 2525 aa24.31■■□□□ 1.48
LSM4-204ENST00000594828 LAMA1P25391 3075 aa24.31■■□□□ 1.48
LSM4-204ENST00000594828 CKAP5Q14008 2032 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 KCNU1A8MYU2 1149 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 H0Y626 953 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 GRAP2O75791 330 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 LUC7L3O95232 432 aaKnown RBP24.3■■□□□ 1.48
LSM4-204ENST00000594828 ERBB2P04626 1255 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 SLC2A3P11169 496 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 GNSP15586 552 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 TACR2P21452 398 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 EEF1GP26641 437 aaKnown RBP24.3■■□□□ 1.48
LSM4-204ENST00000594828 MAOBP27338 520 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 RAPGEF1Q13905 1077 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 TCP11X2Q5H9J9 407 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 FSCBQ5H9T9 825 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 SH3PXD2AQ5TCZ1 1133 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 KLHDC7AQ5VTJ3 777 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 RNF34Q969K3 372 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 GTPBP2Q9BX10 602 aaKnown RBP24.3■■□□□ 1.48
LSM4-204ENST00000594828 PDCL3Q9H2J4 239 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 SYNCQ9H7C4 482 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 FBRSQ9HAH7 460 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 PLCB1Q9NQ66 1216 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 DDIT4Q9NX09 232 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms