RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 PPP2R3CQ969Q6 453 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 SPATA16Q9BXB7 569 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 HES2Q9Y543 173 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 POLR2AP24928 1970 aaKnown RBP16.96■□□□□ 0.31
LIG1-206ENST00000594067 TRIP11Q15643 1979 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 A0A0A0MRY4 1105 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 FKBP6O75344 327 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 DGKIO75912 1065 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 GRM5P41594 1212 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 HNRNPDQ14103 355 aaKnown RBP16.96■□□□□ 0.31
LIG1-206ENST00000594067 TBCCQ15814 346 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 CES3Q6UWW8 571 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 ATG14Q6ZNE5 492 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 RAPH1Q70E73 1250 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 SLC26A9Q7LBE3 791 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 NT5DC4Q86YG4 428 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 ZDHHC17Q8IUH5 632 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 ARHGAP18Q8N392 663 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 GSTCDQ8NEC7 633 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 NDRG1Q92597 394 aaKnown RBP16.96■□□□□ 0.31
LIG1-206ENST00000594067 SPATA13Q96N96 652 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 PGLYRP2Q96PD5 576 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 CCDC28BQ9BUN5 200 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 EBF3Q9H4W6 596 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 DMAP1Q9NPF5 467 aaPredicted RBP16.96■□□□□ 0.31
LIG1-206ENST00000594067 TMPRSS4Q9NRS4 437 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 SEPT10Q9P0V9 454 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 SCN1AP35498 2009 aa16.96■□□□□ 0.3
LIG1-206ENST00000594067 PAPPA2Q9BXP8 1791 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 MFSD11O43934 449 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 PLIN3O60664 434 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 ALDH1A2O94788 518 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 CNTFP26441 200 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 SNX16P57768 344 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 SLC25A3Q00325 362 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 TMEM62Q0P6H9 643 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 TUBB3Q13509 450 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 CUL3Q13618 768 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 PPM1JQ5JR12 505 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 RNF111Q6ZNA4 994 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 ARMCX2Q7L311 632 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 ADGRG6Q86SQ4 1221 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 NCSTNQ92542 709 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 FAM124BQ9H5Z6 455 aaPredicted RBP16.95■□□□□ 0.3
LIG1-206ENST00000594067 PNPOQ9NVS9 261 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 TBC1D30Q9Y2I9 924 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 GLRA3O75311 464 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 CDK7P50613 346 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 LIN52Q52LA3 116 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 RSPH3Q86UC2 560 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 C10orf107Q8IVU9 208 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 ARNTL2Q8WYA1 636 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 CDKL2Q92772 493 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 MORF4L1Q9UBU8 362 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 SOX13Q9UN79 622 aa16.95■□□□□ 0.3
LIG1-206ENST00000594067 SYNJ2BP-COX16A0A087WUM0 186 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 ATP5BP06576 529 aaKnown RBP16.94■□□□□ 0.3
LIG1-206ENST00000594067 AOC1P19801 751 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 YY1P25490 414 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 LMO2P25791 158 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 FDFT1P37268 417 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 ARL4AP40617 200 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 PDE1BQ01064 536 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 LAMC2Q13753 1193 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 PCLAFQ15004 111 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 KIZQ2M2Z5 673 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 AAGABQ6PD74 315 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 OLFM3Q96PB7 478 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 S100A14Q9HCY8 104 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 COX16Q9P0S2 106 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 USP3Q9Y6I4 520 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 RNF103O00237 685 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 BST2Q10589 180 aaKnown RBP16.94■□□□□ 0.3
LIG1-206ENST00000594067 OLIG2Q13516 323 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 ARHGAP17Q68EM7 881 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 DPY19L2Q6NUT2 758 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 LRRC8BQ6P9F7 803 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 CYS1Q717R9 158 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 MAVSQ7Z434 540 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 EIF2AQ9BY44 585 aaKnown RBP16.94■□□□□ 0.3
LIG1-206ENST00000594067 SHCBP1LQ9BZQ2 653 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 SYBUQ9NX95 663 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 ZDHHC7Q9NXF8 308 aa16.94■□□□□ 0.3
LIG1-206ENST00000594067 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.94■□□□□ 0.3
LIG1-206ENST00000594067 APOBEC2Q9Y235 224 aaKnown RBP16.94■□□□□ 0.3
LIG1-206ENST00000594067 ARHGAP42A6NI28 874 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 TOMM70O94826 608 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 PRKCGP05129 697 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 ITGA2BP08514 1039 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 F7P08709 466 aaPredicted RBP16.93■□□□□ 0.3
LIG1-206ENST00000594067 ERVK-10P10266 1014 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 PSMB4P28070 264 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 MLH1P40692 756 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 DYNC1I2Q13409 638 aaKnown RBP16.93■□□□□ 0.3
LIG1-206ENST00000594067 RABGAP1LQ5R372 815 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 POTEAQ6S8J7 498 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 PDSS2Q86YH6 399 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 ANKRD52Q8NB46 1076 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 ACMSDQ8TDX5 336 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 ATP2A3Q93084 1043 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms