RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 MAP9Q49MG5 647 aa20.33■□□□□ 0.84
LSM4-203ENST00000593829 NAIF1Q69YI7 327 aaPredicted RBP20.33■□□□□ 0.84
LSM4-203ENST00000593829 DNAJC24Q6P3W2 148 aa20.33■□□□□ 0.84
LSM4-203ENST00000593829 WDR59Q6PJI9 974 aa20.33■□□□□ 0.84
LSM4-203ENST00000593829 EMC1Q8N766 993 aa20.33■□□□□ 0.84
LSM4-203ENST00000593829 CLDN23Q96B33 292 aa20.33■□□□□ 0.84
LSM4-203ENST00000593829 LMAN1LQ9HAT1 526 aa20.33■□□□□ 0.84
LSM4-203ENST00000593829 SLC12A6Q9UHW9 1150 aa20.33■□□□□ 0.84
LSM4-203ENST00000593829 SIGLEC16A6NMB1 481 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 NDUFA10O95299 355 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 MOCS2O96007 188 aaPredicted RBP20.32■□□□□ 0.84
LSM4-203ENST00000593829 F9P00740 461 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 CYBBP04839 570 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 RHOXF2BP0C7M4 288 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 CHRNB1P11230 501 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 TYRP14679 529 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 DRD1P21728 446 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 RRM1P23921 792 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 DGKKQ5KSL6 1271 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 PAPD7Q5XG87 772 aaKnown RBP20.32■□□□□ 0.84
LSM4-203ENST00000593829 TRNP1Q6NT89 227 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 NAT16Q8N8M0 369 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 PGAP3Q96FM1 320 aaPredicted RBP20.32■□□□□ 0.84
LSM4-203ENST00000593829 TBCBQ99426 244 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 DDX50Q9BQ39 737 aaKnown RBP20.32■□□□□ 0.84
LSM4-203ENST00000593829 RHOXF2Q9BQY4 288 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 FBRSL1Q9HCM7 1045 aaKnown RBP20.32■□□□□ 0.84
LSM4-203ENST00000593829 DLGAP2Q9P1A6 1054 aa20.32■□□□□ 0.84
LSM4-203ENST00000593829 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.31■□□□□ 0.84
LSM4-203ENST00000593829 GJB6O95452 261 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 PDGFRAP16234 1089 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 MAGEA9P43362 315 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 RPS9P46781 194 aaKnown RBP20.31■□□□□ 0.84
LSM4-203ENST00000593829 SLC6A11P48066 632 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 DEUP1Q05D60 604 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 CCINQ13939 588 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 PPP2R5DQ14738 602 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 OTUD1Q5VV17 481 aaPredicted RBP20.31■□□□□ 0.84
LSM4-203ENST00000593829 FSTL4Q6MZW2 842 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 SND1Q7KZF4 910 aaKnown RBP eCLIP20.31■□□□□ 0.84
LSM4-203ENST00000593829 C12orf40Q86WS4 652 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 ETFBKMTQ8IXQ9 262 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 ATP6V0D2Q8N8Y2 350 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 JOSD2Q8TAC2 188 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 BTN2A3PQ96KV6 586 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 CFAP57Q96MR6 1250 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 XPO6Q96QU8 1125 aaKnown RBP20.31■□□□□ 0.84
LSM4-203ENST00000593829 ADAM33Q9BZ11 813 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 ISCUQ9H1K1 167 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 TCRBV5S1A1TA0A578 114 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 C2CD4BA6NLJ0 364 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 KCNU1A8MYU2 1149 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 TFE3P19532 575 aaPredicted RBP20.31■□□□□ 0.84
LSM4-203ENST00000593829 ABCB4P21439 1286 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 SDC4P31431 198 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 MPPE1Q53F39 396 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 FYB2Q5VWT5 728 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 NOA1Q8NC60 698 aaKnown RBP20.31■□□□□ 0.84
LSM4-203ENST00000593829 DDI1Q8WTU0 396 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 RXFP2Q8WXD0 754 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 BHMTQ93088 406 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 TRIM11Q96F44 468 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 PIGVQ9NUD9 493 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 PLK2Q9NYY3 685 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 DEC1Q9P2X7 70 aa20.31■□□□□ 0.84
LSM4-203ENST00000593829 REXO2Q9Y3B8 237 aaKnown RBP20.31■□□□□ 0.84
LSM4-203ENST00000593829 ZDBF2Q9HCK1 2354 aa20.3■□□□□ 0.84
LSM4-203ENST00000593829 A0A087X0T9 212 aa20.3■□□□□ 0.84
LSM4-203ENST00000593829 ANKRD62A6NC57 917 aa20.3■□□□□ 0.84
LSM4-203ENST00000593829 CACNG3O60359 315 aa20.3■□□□□ 0.84
LSM4-203ENST00000593829 PENKP01210 267 aaPredicted RBP20.3■□□□□ 0.84
LSM4-203ENST00000593829 FAM228BP0C875 321 aa20.3■□□□□ 0.84
LSM4-203ENST00000593829 RFC1P35251 1148 aaPredicted RBP20.3■□□□□ 0.84
LSM4-203ENST00000593829 EIF4A3P38919 411 aaKnown RBP20.3■□□□□ 0.84
LSM4-203ENST00000593829 CKAP4Q07065 602 aaKnown RBP20.3■□□□□ 0.84
LSM4-203ENST00000593829 MTA1Q13330 715 aa20.3■□□□□ 0.84
LSM4-203ENST00000593829 PREPLQ4J6C6 727 aaPredicted RBP20.3■□□□□ 0.84
LSM4-203ENST00000593829 FAM133BQ5BKY9 247 aaKnown RBP20.3■□□□□ 0.84
LSM4-203ENST00000593829 DNAAF5Q86Y56 855 aa20.3■□□□□ 0.84
LSM4-203ENST00000593829 SYNPOQ8N3V7 929 aa20.3■□□□□ 0.84
LSM4-203ENST00000593829 TMA16Q96EY4 203 aaKnown RBP20.3■□□□□ 0.84
LSM4-203ENST00000593829 PARVAQ9NVD7 372 aa20.3■□□□□ 0.84
LSM4-203ENST00000593829 GOLGA6L7A0A1B0GV03 622 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 GFRA2O00451 464 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 TSPAN3O60637 253 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 TULP3O75386 442 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 MYBL1P10243 752 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 PTPN9P43378 593 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 CXCR3P49682 368 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 NADSYN1Q6IA69 706 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 DCUN1D2Q6PH85 259 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 BNIPLQ7Z465 357 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 WDCPQ9H6R7 721 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 ARHGEF4Q9NR80 690 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 RBM12Q9NTZ6 932 aaKnown RBP20.29■□□□□ 0.84
LSM4-203ENST00000593829 DNAJC17Q9NVM6 304 aaKnown RBP20.29■□□□□ 0.84
LSM4-203ENST00000593829 XPO7Q9UIA9 1087 aaKnown RBP20.29■□□□□ 0.84
LSM4-203ENST00000593829 MYOFQ9NZM1 2061 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 SSU72P8A0A1W2PR75 194 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 EGFP01133 1207 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms