RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CETN1Q12798 172 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 PTPRNQ16849 979 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 PIK3R6Q5UE93 754 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 PMF1Q6P1K2 205 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 RFWD3Q6PCD5 774 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 KIAA0907Q7Z7F0 614 aaPredicted RBP23.56■■□□□ 1.36
SSBP4-203ENST00000593641 PPM1KQ8N3J5 372 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 C1orf216Q8TAB5 229 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 SLC35F5Q8WV83 523 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 TFAP2BQ92481 460 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 SUN2Q9UH99 717 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.56■■□□□ 1.36
SSBP4-203ENST00000593641 TP53BP1Q12888 1972 aaPredicted RBP23.56■■□□□ 1.36
SSBP4-203ENST00000593641 FLRT2O43155 660 aa23.55■■□□□ 1.36
SSBP4-203ENST00000593641 IGLV3-27P01718 113 aa23.55■■□□□ 1.36
SSBP4-203ENST00000593641 LTFP02788 710 aa23.55■■□□□ 1.36
SSBP4-203ENST00000593641 CSNK1EP49674 416 aaKnown RBP23.55■■□□□ 1.36
SSBP4-203ENST00000593641 TBX4P57082 545 aa23.55■■□□□ 1.36
SSBP4-203ENST00000593641 RPS14P62263 151 aaKnown RBP23.55■■□□□ 1.36
SSBP4-203ENST00000593641 BNC1Q01954 994 aa23.55■■□□□ 1.36
SSBP4-203ENST00000593641 CNGA2Q16280 664 aa23.55■■□□□ 1.36
SSBP4-203ENST00000593641 CCDC40Q4G0X9 1142 aa23.55■■□□□ 1.36
SSBP4-203ENST00000593641 MFN1Q8IWA4 741 aa23.55■■□□□ 1.36
SSBP4-203ENST00000593641 ERCC4Q92889 916 aaPredicted RBP23.55■■□□□ 1.36
SSBP4-203ENST00000593641 DDX50Q9BQ39 737 aaKnown RBP23.55■■□□□ 1.36
SSBP4-203ENST00000593641 PRSS16Q9NQE7 514 aa23.55■■□□□ 1.36
SSBP4-203ENST00000593641 PCDHGB2Q9Y5G2 931 aa23.55■■□□□ 1.36
SSBP4-203ENST00000593641 APC2O95996 2303 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 ACSL4O60488 711 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 FBXO21O94952 628 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 C7P10643 843 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 CD70P32970 193 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 ST8SIA6P61647 398 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 RING1Q06587 406 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 SCAPQ12770 1279 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 SUZ12Q15022 739 aaKnown RBP23.54■■□□□ 1.36
SSBP4-203ENST00000593641 FAM133BQ5BKY9 247 aaKnown RBP23.54■■□□□ 1.36
SSBP4-203ENST00000593641 ZNF776Q68DI1 518 aaPredicted RBP23.54■■□□□ 1.36
SSBP4-203ENST00000593641 PROSER1Q86XN7 944 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 HJURPQ8NCD3 748 aaPredicted RBP23.54■■□□□ 1.36
SSBP4-203ENST00000593641 SPATA20Q8TB22 786 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 WFDC5Q8TCV5 224 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 HSFY1Q96LI6 401 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 CEP63Q96MT8 703 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 CDC6Q99741 560 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 SGK2Q9HBY8 427 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 STIM2Q9P246 746 aa23.54■■□□□ 1.36
SSBP4-203ENST00000593641 LAMA5O15230 3695 aa23.53■■□□□ 1.36
SSBP4-203ENST00000593641 GOLGA6L7A0A1B0GV03 622 aa23.53■■□□□ 1.36
SSBP4-203ENST00000593641 PMM2O15305 246 aa23.53■■□□□ 1.36
SSBP4-203ENST00000593641 FSBPO95073 299 aa23.53■■□□□ 1.36
SSBP4-203ENST00000593641 BRD2P25440 801 aaKnown RBP23.53■■□□□ 1.36
SSBP4-203ENST00000593641 SLC6A4P31645 630 aa23.53■■□□□ 1.36
SSBP4-203ENST00000593641 GRIA4P48058 902 aa23.53■■□□□ 1.36
SSBP4-203ENST00000593641 KIF19Q2TAC6 998 aa23.53■■□□□ 1.36
SSBP4-203ENST00000593641 CCDC117Q8IWD4 279 aaPredicted RBP23.53■■□□□ 1.36
SSBP4-203ENST00000593641 RHBDD1Q8TEB9 315 aa23.53■■□□□ 1.36
SSBP4-203ENST00000593641 CLEC4CQ8WTT0 213 aa23.53■■□□□ 1.36
SSBP4-203ENST00000593641 AZIN2Q96A70 460 aa23.53■■□□□ 1.36
SSBP4-203ENST00000593641 BIRC7Q96CA5 298 aa23.53■■□□□ 1.36
SSBP4-203ENST00000593641 TM9SF3Q9HD45 589 aa23.53■■□□□ 1.36
SSBP4-203ENST00000593641 OSGEPQ9NPF4 335 aa23.53■■□□□ 1.36
SSBP4-203ENST00000593641 LHX6Q9UPM6 363 aa23.53■■□□□ 1.36
SSBP4-203ENST00000593641 PPP1R2P41236 205 aa23.52■■□□□ 1.36
SSBP4-203ENST00000593641 CDH18Q13634 790 aa23.52■■□□□ 1.36
SSBP4-203ENST00000593641 CCNI2Q6ZMN8 369 aaPredicted RBP23.52■■□□□ 1.36
SSBP4-203ENST00000593641 ADAT2Q7Z6V5 191 aaKnown RBP23.52■■□□□ 1.36
SSBP4-203ENST00000593641 SLCO6A1Q86UG4 719 aa23.52■■□□□ 1.36
SSBP4-203ENST00000593641 DHTKD1Q96HY7 919 aaPredicted RBP23.52■■□□□ 1.36
SSBP4-203ENST00000593641 SERPINB11Q96P15 392 aa23.52■■□□□ 1.36
SSBP4-203ENST00000593641 MIS12Q9H081 205 aa23.52■■□□□ 1.36
SSBP4-203ENST00000593641 KIAA1522Q9P206 1035 aaPredicted RBP23.52■■□□□ 1.36
SSBP4-203ENST00000593641 SCML1Q9UN30 329 aa23.52■■□□□ 1.36
SSBP4-203ENST00000593641 NCKAP1Q9Y2A7 1128 aa23.52■■□□□ 1.36
SSBP4-203ENST00000593641 ANKRD6Q9Y2G4 727 aa23.52■■□□□ 1.36
SSBP4-203ENST00000593641 SNX11Q9Y5W9 270 aa23.52■■□□□ 1.36
SSBP4-203ENST00000593641 SLCO1B1Q9Y6L6 691 aa23.52■■□□□ 1.36
SSBP4-203ENST00000593641 RNF225M0QZC1 329 aaPredicted RBP23.51■■□□□ 1.35
SSBP4-203ENST00000593641 P4HA2O15460 535 aa23.51■■□□□ 1.35
SSBP4-203ENST00000593641 SART1O43290 800 aaKnown RBP23.51■■□□□ 1.35
SSBP4-203ENST00000593641 RNASEH1O60930 286 aaKnown RBP23.51■■□□□ 1.35
SSBP4-203ENST00000593641 GABBR2O75899 941 aa23.51■■□□□ 1.35
SSBP4-203ENST00000593641 CD27P26842 260 aa23.51■■□□□ 1.35
SSBP4-203ENST00000593641 ENGASEQ8NFI3 743 aa23.51■■□□□ 1.35
SSBP4-203ENST00000593641 FIBINQ8TAL6 211 aa23.51■■□□□ 1.35
SSBP4-203ENST00000593641 BAHD1Q8TBE0 780 aaPredicted RBP23.51■■□□□ 1.35
SSBP4-203ENST00000593641 GANCQ8TET4 914 aa23.51■■□□□ 1.35
SSBP4-203ENST00000593641 KAT5Q92993 513 aa23.51■■□□□ 1.35
SSBP4-203ENST00000593641 PRICKLE1Q96MT3 831 aaPredicted RBP23.51■■□□□ 1.35
SSBP4-203ENST00000593641 TIGD1Q96MW7 591 aa23.51■■□□□ 1.35
SSBP4-203ENST00000593641 CCDC86Q9H6F5 360 aaKnown RBP23.51■■□□□ 1.35
SSBP4-203ENST00000593641 KNTC1P50748 2209 aa23.51■■□□□ 1.35
SSBP4-203ENST00000593641 PLXNA2O75051 1894 aa23.5■■□□□ 1.35
SSBP4-203ENST00000593641 NYNRINQ9P2P1 1898 aaKnown RBP23.5■■□□□ 1.35
SSBP4-203ENST00000593641 ASLP04424 464 aa23.5■■□□□ 1.35
SSBP4-203ENST00000593641 CSKP41240 450 aa23.5■■□□□ 1.35
SSBP4-203ENST00000593641 CCT8P50990 548 aa23.5■■□□□ 1.35
SSBP4-203ENST00000593641 SFSWAPQ12872 951 aaKnown RBP23.5■■□□□ 1.35
SSBP4-203ENST00000593641 DBX2Q6ZNG2 339 aa23.5■■□□□ 1.35
SSBP4-203ENST00000593641 USP30Q70CQ3 517 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms