RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ITGA5P08648 1049 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 CD53P19397 219 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 MATN1P21941 496 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 CERS1P27544 350 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 POU5F1Q01860 360 aaKnown RBP5.57□□□□□ -1.52
SMAD4-216ENST00000593223 SLC14A1Q13336 389 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 ZNF268Q14587 947 aaPredicted RBP5.57□□□□□ -1.52
SMAD4-216ENST00000593223 GRM4Q14833 912 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 SRSF7Q16629 238 aaKnown RBP eCLIP5.57□□□□□ -1.52
SMAD4-216ENST00000593223 ZACNQ401N2 412 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 C10orf62Q5T681 223 aaPredicted RBP5.57□□□□□ -1.52
SMAD4-216ENST00000593223 KIAA1614Q5VZ46 1190 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 ZNF66Q6ZN08 573 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 NRSN1Q8IZ57 195 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 FAM71BQ8TC56 605 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 LTV1Q96GA3 475 aaPredicted RBP5.57□□□□□ -1.52
SMAD4-216ENST00000593223 SH2D3AQ9BRG2 576 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 ABHD10Q9NUJ1 306 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 GAR1Q9NY12 217 aaKnown RBP5.57□□□□□ -1.52
SMAD4-216ENST00000593223 FLRT1Q9NZU1 646 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 ANAPC4Q9UJX5 808 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 HEMK1Q9Y5R4 338 aaPredicted RBP5.57□□□□□ -1.52
SMAD4-216ENST00000593223 SYNMO15061 1565 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 A2ML1A8K2U0 1454 aa5.57□□□□□ -1.52
SMAD4-216ENST00000593223 CCDC187A0A096LP49 1063 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 WIPF3A6NGB9 483 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 PPP6CO00743 305 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 FCHO1O14526 889 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 CTIFO43310 598 aaKnown RBP5.56□□□□□ -1.52
SMAD4-216ENST00000593223 TNFRSF6BO95407 300 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 LDHAP00338 332 aaKnown RBP5.56□□□□□ -1.52
SMAD4-216ENST00000593223 ATF7P17544 494 aaPredicted RBP5.56□□□□□ -1.52
SMAD4-216ENST00000593223 KLRK1P26718 216 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 DUSP1P28562 367 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 VPS41P49754 854 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 FOXF2Q12947 444 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 PTK2BQ14289 1009 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 KPNB1Q14974 876 aaKnown RBP5.56□□□□□ -1.52
SMAD4-216ENST00000593223 CEP78Q5JTW2 689 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 MSANTD2Q6P1R3 559 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 ZNF575Q86XF7 245 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 CNGA4Q8IV77 575 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 C8orf58Q8NAV2 365 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 OR52L2PQ8NGH6 319 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 OSR1Q8TAX0 266 aaPredicted RBP5.56□□□□□ -1.52
SMAD4-216ENST00000593223 SLC22A17Q8WUG5 538 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 PPM1EQ8WY54 764 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 AKAP1Q92667 903 aaKnown RBP eCLIP5.56□□□□□ -1.52
SMAD4-216ENST00000593223 NUAK2Q9H093 628 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 FRMD4BQ9Y2L6 1034 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 PCDHB7Q9Y5E2 793 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 MED14O60244 1454 aa5.56□□□□□ -1.52
SMAD4-216ENST00000593223 CFAP74Q9C0B2 1584 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 WDR17Q8IZU2 1322 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 UTRNP46939 3433 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 IFRD1O00458 451 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-216ENST00000593223 DSCR3O14972 297 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 CER1O95813 267 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 MBPP02686 304 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-216ENST00000593223 TUBB4AP04350 444 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 FBLP22087 321 aaKnown RBP5.55□□□□□ -1.52
SMAD4-216ENST00000593223 EPHB2P29323 1055 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 PDIA3P30101 505 aaKnown RBP5.55□□□□□ -1.52
SMAD4-216ENST00000593223 LMOD3Q0VAK6 560 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 BLMHQ13867 455 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 CCDC142Q17RM4 750 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 TRIM71Q2Q1W2 868 aaKnown RBP5.55□□□□□ -1.52
SMAD4-216ENST00000593223 CCDC38Q502W7 563 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 ATPAF1Q5TC12 328 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-216ENST00000593223 ANKRD40Q6AI12 368 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 ACSM6Q6P461 480 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 ZNF813Q6ZN06 617 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 KAZALD1Q96I82 304 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 SEMA4CQ9C0C4 833 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 TMX4Q9H1E5 349 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-216ENST00000593223 PDGFCQ9NRA1 345 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 RXFP3Q9NSD7 469 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 SCAF8Q9UPN6 1271 aaKnown RBP5.55□□□□□ -1.52
SMAD4-216ENST00000593223 UBE2J1Q9Y385 318 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-216ENST00000593223 COL16A1Q07092 1604 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-216ENST00000593223 DIP2CQ9Y2E4 1556 aa5.55□□□□□ -1.52
SMAD4-216ENST00000593223 CLSPNQ9HAW4 1339 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 DHHO43323 396 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 EPB41L2O43491 1005 aaKnown RBP5.54□□□□□ -1.52
SMAD4-216ENST00000593223 CSTBP04080 98 aaKnown RBP5.54□□□□□ -1.52
SMAD4-216ENST00000593223 ITGA2BP08514 1039 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 TACR3P29371 465 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 SLC8A1P32418 973 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 THBS4P35443 961 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 ARHGAP25P42331 645 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 ABCG1P45844 678 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 MAPRE1Q15691 268 aaKnown RBP5.54□□□□□ -1.52
SMAD4-216ENST00000593223 EZH2Q15910 746 aaKnown RBP5.54□□□□□ -1.52
SMAD4-216ENST00000593223 ZNF569Q5MCW4 686 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 YTHDF3Q7Z739 585 aaKnown RBP5.54□□□□□ -1.52
SMAD4-216ENST00000593223 REXO5Q96IC2 774 aaKnown RBP5.54□□□□□ -1.52
SMAD4-216ENST00000593223 FAR2Q96K12 515 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 RMDN3Q96TC7 470 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 FAM118BQ9BPY3 351 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 PAGR1Q9BTK6 254 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms