RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, human

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-218	ENST00000593053	PCDHGC3	Q9UN70	934 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SLC6A14	Q9UN76	642 aa		13.58	□□□□□ -0.24
PRKCSH-218	ENST00000593053	MYO18A	Q92614	2054 aa	Known RBP	13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	IGLV3-25	P01717	112 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ATP5B	P06576	529 aa	Known RBP	13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SERPINF2	P08697	491 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	DLD	P09622	509 aa	Known RBP	13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ACADM	P11310	421 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	POLR2E	P19388	210 aa	Known RBP	13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CLCN1	P35523	988 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	KRT9	P35527	623 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	NOVA1	P51513	510 aa	Known RBP	13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	TPMT	P51580	245 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CDK17	Q00537	523 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	GFPT1	Q06210	699 aa	Predicted RBP	13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CAMK2G	Q13555	558 aa	Predicted RBP	13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	KCNJ12	Q14500	433 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	DCAF6	Q58WW2	860 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SYCP2L	Q5T4T6	812 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	RAP1GAP2	Q684P5	730 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PSAPL1	Q6NUJ1	521 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CLEC17A	Q6ZS10	378 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SLC47A2	Q86VL8	602 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CHSY1	Q86X52	802 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	LGI2	Q8N0V4	545 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CFAP52	Q8N1V2	620 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CARNMT1	Q8N4J0	409 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	OR2T3	Q8NH03	318 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	FIBIN	Q8TAL6	211 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	LMLN	Q96KR4	655 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	NOX5	Q96PH1	765 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	GTPBP2	Q9BX10	602 aa	Known RBP	13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	GPR174	Q9BXC1	333 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	LHX5	Q9H2C1	402 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	FAM204A	Q9H8W3	233 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SAMSN1	Q9NSI8	373 aa	Known RBP	13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	WSB2	Q9NYS7	404 aa	Predicted RBP	13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	THADA	Q6YHU6	1953 aa		13.57	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	GIPC1	O14908	333 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	GRAP2	O75791	330 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ERBB2	P04626	1255 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	TACR2	P21452	398 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	MAOB	P27338	520 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	OXTR	P30559	389 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ATXN3	P54252	364 aa	Predicted RBP	13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CDH18	Q13634	790 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	RAPGEF1	Q13905	1077 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	EFHC1	Q5JVL4	640 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	WDR45B	Q5MNZ6	344 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SH3PXD2A	Q5TCZ1	1133 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SMYD5	Q6GMV2	418 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	OR6B2	Q6IFH4	312 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	DPY19L2P1	Q6NXN4	242 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	MMS22L	Q6ZRQ5	1243 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	FAM183BP	Q6ZVS7	135 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	RABEPK	Q7Z6M1	372 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	FAM124A	Q86V42	546 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	FAM71A	Q8IYT1	594 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	DEFB106A	Q8N104	65 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	BTN2A3P	Q96KV6	586 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CNTNAP3B	Q96NU0	1288 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SLC2A13	Q96QE2	648 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CNTNAP3	Q9BZ76	1288 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SYNC	Q9H7C4	482 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CAPN10	Q9HC96	672 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PLCB1	Q9NQ66	1216 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PRSS16	Q9NQE7	514 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ASNSD1	Q9NWL6	643 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	DDIT4	Q9NX09	232 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	COX16	Q9P0S2	106 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	INTS6	Q9UL03	887 aa	Known RBP	13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CEP83	Q9Y592	693 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	FHOD1	Q9Y613	1164 aa		13.56	□□□□□ -0.24
PRKCSH-218	ENST00000593053	MEI4	A8MW99	385 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	KCNU1	A8MYU2	1149 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053		H0Y626	953 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	HSF2BP	O75031	334 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	IGLV3-19	P01714	112 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	GLI1	P08151	1106 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CSK	P41240	450 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	BPIFB4	P59827	614 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	KCNMA1	Q12791	1236 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	DRAP1	Q14919	205 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PTPN20	Q4JDL3	420 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	TCP11X2	Q5H9J9	407 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	FSCB	Q5H9T9	825 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	KLHDC7A	Q5VTJ3	777 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	OLFML1	Q6UWY5	402 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	ATP6V0D2	Q8N8Y2	350 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	CADM4	Q8NFZ8	388 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	RNF34	Q969K3	372 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	TTC17	Q96AE7	1141 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	NUP58	Q9BVL2	599 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	PDCL3	Q9H2J4	239 aa		13.55	□□□□□ -0.24
PRKCSH-218	ENST00000593053	MTG2	Q9H4K7	406 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms