RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 SASS6Q6UVJ0 657 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 OLFML1Q6UWY5 402 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 MFN1Q8IWA4 741 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 CFAP52Q8N1V2 620 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 LMLNQ96KR4 655 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 EDEM2Q9BV94 578 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 FAM204AQ9H8W3 233 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 PRDM16Q9HAZ2 1276 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 TMEM74BQ9NUR3 256 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 FANCLQ9NW38 375 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 CEP83Q9Y592 693 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 NYNRINQ9P2P1 1898 aaKnown RBP14.38□□□□□ -0.11
APOC1-208ENST00000592535 SYNJ2BP-COX16A0A087WUM0 186 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 LNP1A1A4G5 178 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 FAM170AA1A519 330 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 TYW5A2RUC4 315 aaKnown RBP14.38□□□□□ -0.11
APOC1-208ENST00000592535 F8VZ95 297 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 KHNYNO15037 678 aaKnown RBP14.38□□□□□ -0.11
APOC1-208ENST00000592535 DAB1O75553 588 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 TACR2P21452 398 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 ITPKAP23677 461 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 COPAP53621 1224 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 LMAN2Q12907 356 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 PTPRNQ16849 979 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 TAF3Q5VWG9 929 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 IL31Q6EBC2 164 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 CHSY1Q86X52 802 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 CACUL1Q86Y37 369 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 TMPRSS6Q8IU80 811 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 SYT12Q8IV01 421 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 SLC41A1Q8IVJ1 513 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 LGI2Q8N0V4 545 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 CARNMT1Q8N4J0 409 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 ZNF366Q8N895 744 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 ATP6V0D2Q8N8Y2 350 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 FIBINQ8TAL6 211 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 DDX1Q92499 740 aaKnown RBP14.38□□□□□ -0.11
APOC1-208ENST00000592535 BTN2A3PQ96KV6 586 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 STK33Q9BYT3 514 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 GANQ9H2C0 597 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 PDCL3Q9H2J4 239 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 TMEM245Q9H330 911 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 SYNCQ9H7C4 482 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 ANO10Q9NW15 660 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.38□□□□□ -0.113e-11■■■□□ 18.3
APOC1-208ENST00000592535 DDIT4Q9NX09 232 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 COX16Q9P0S2 106 aa14.38□□□□□ -0.11
APOC1-208ENST00000592535 LUC7L3O95232 432 aaKnown RBP14.37□□□□□ -0.11
APOC1-208ENST00000592535 MBD3O95983 291 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 DLDP09622 509 aaKnown RBP14.37□□□□□ -0.11
APOC1-208ENST00000592535 POLR2EP19388 210 aaKnown RBP14.37□□□□□ -0.11
APOC1-208ENST00000592535 CDH5P33151 784 aaPredicted RBP14.37□□□□□ -0.11
APOC1-208ENST00000592535 SNX16P57768 344 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 IRX4P78413 519 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 SLC6A3Q01959 620 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 ZNF33AQ06730 810 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 CAMK2GQ13555 558 aaPredicted RBP14.37□□□□□ -0.11
APOC1-208ENST00000592535 CDH18Q13634 790 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 STX1AQ16623 288 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 FSCBQ5H9T9 825 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 CCDC183Q5T5S1 534 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 MMS22LQ6ZRQ5 1243 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 SLC26A9Q7LBE3 791 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 NOP9Q86U38 636 aaKnown RBP14.37□□□□□ -0.11
APOC1-208ENST00000592535 METTL3Q86U44 580 aaKnown RBP14.37□□□□□ -0.11
APOC1-208ENST00000592535 ZNF557Q8N988 423 aaPredicted RBP14.37□□□□□ -0.11
APOC1-208ENST00000592535 TMEM35BQ8NCS4 154 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 PRCCQ92733 491 aaPredicted RBP14.37□□□□□ -0.11
APOC1-208ENST00000592535 SIPA1Q96FS4 1042 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 ITM2CQ9NQX7 267 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 USP36Q9P275 1121 aaKnown RBP14.37□□□□□ -0.11
APOC1-208ENST00000592535 EVLQ9UI08 416 aaPredicted RBP14.37□□□□□ -0.11
APOC1-208ENST00000592535 PILRBQ9UKJ0 227 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 INTS6Q9UL03 887 aaKnown RBP14.37□□□□□ -0.11
APOC1-208ENST00000592535 PLA2G4CQ9UP65 541 aa14.37□□□□□ -0.11
APOC1-208ENST00000592535 DNAH14Q0VDD8 3507 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 C4orf47A7E2U8 309 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 KCNU1A8MYU2 1149 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 F5H5T6 163 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 TM4SF5O14894 197 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 EPHB6O15197 1021 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 NDUFS2O75306 463 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 ATP5BP06576 529 aaKnown RBP14.36□□□□□ -0.11
APOC1-208ENST00000592535 TPM2P07951 284 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 CD6P30203 668 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 TPMTP51580 245 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 COPB1P53618 953 aaKnown RBP14.36□□□□□ -0.11
APOC1-208ENST00000592535 MYL5Q02045 173 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 NME3Q13232 169 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 TRIM61Q5EBN2 209 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 PPM1JQ5JR12 505 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 FKBP15Q5T1M5 1219 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 OTUD1Q5VV17 481 aaPredicted RBP14.36□□□□□ -0.11
APOC1-208ENST00000592535 PEAR1Q5VY43 1037 aaPredicted RBP14.36□□□□□ -0.11
APOC1-208ENST00000592535 ZNF397Q8NF99 534 aaPredicted RBP14.36□□□□□ -0.11
APOC1-208ENST00000592535 OR2T3Q8NH03 318 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 RNF34Q969K3 372 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 HSPA12BQ96MM6 686 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 PRMT1Q99873 361 aaKnown RBP14.36□□□□□ -0.11
APOC1-208ENST00000592535 FAM207AQ9NSI2 230 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms