RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 ZBTB16Q05516 673 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 RING1Q06587 406 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 SFSWAPQ12872 951 aaKnown RBP10.55□□□□□ -0.72
VMP1-214ENST00000592106 GRIK2Q13002 908 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 NNTQ13423 1086 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 CAMK2GQ13555 558 aaPredicted RBP10.55□□□□□ -0.72
VMP1-214ENST00000592106 PKDCCQ504Y2 493 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 CACUL1Q86Y37 369 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 NAXDQ8IW45 347 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 MFN1Q8IWA4 741 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.55□□□□□ -0.72
VMP1-214ENST00000592106 HJURPQ8NCD3 748 aaPredicted RBP10.55□□□□□ -0.72
VMP1-214ENST00000592106 ENGASEQ8NFI3 743 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 NELFBQ8WX92 580 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 NDRG1Q92597 394 aaKnown RBP10.55□□□□□ -0.72
VMP1-214ENST00000592106 COL26A1Q96A83 441 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 FAM149B1Q96BN6 582 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 FAM81BQ96LP2 452 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 SERPINB11Q96P15 392 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 ABCB8Q9NUT2 735 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 KIAA1468Q9P260 1216 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 SUN2Q9UH99 717 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 MAN1B1Q9UKM7 699 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 CHD8Q9HCK8 2581 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 BCAT2O15382 392 aaPredicted RBP10.54□□□□□ -0.72
VMP1-214ENST00000592106 HYAL3O43820 417 aaPredicted RBP10.54□□□□□ -0.72
VMP1-214ENST00000592106 ACSL4O60488 711 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 TBL1XO60907 577 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 RNASEH1O60930 286 aaKnown RBP10.54□□□□□ -0.72
VMP1-214ENST00000592106 MOCS3O95396 460 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 APOEP02649 317 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 ASLP04424 464 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 DLDP09622 509 aaKnown RBP10.54□□□□□ -0.72
VMP1-214ENST00000592106 SPINK2P20155 84 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 MAOBP27338 520 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 MATKP42679 507 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 CKAP5Q14008 2032 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 TEAD4Q15561 434 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 MBLAC2Q68D91 279 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 ZNF776Q68DI1 518 aaPredicted RBP10.54□□□□□ -0.72
VMP1-214ENST00000592106 PMF1Q6P1K2 205 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 LAPTM4BQ86VI4 370 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 SPNS2Q8IVW8 549 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 TTC13Q8NBP0 860 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 CYB5D2Q8WUJ1 264 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 SLC35F5Q8WV83 523 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 SORCS1Q8WY21 1168 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 ZCCHC14Q8WYQ9 949 aaKnown RBP10.54□□□□□ -0.72
VMP1-214ENST00000592106 ERCC4Q92889 916 aaPredicted RBP10.54□□□□□ -0.72
VMP1-214ENST00000592106 AZIN2Q96A70 460 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 P2RY11Q96G91 374 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 BTBD1Q9H0C5 482 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 TMEM245Q9H330 911 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 ZMIZ1Q9ULJ6 1067 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 CLEC4EQ9ULY5 219 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 SCML1Q9UN30 329 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 CTNND2Q9UQB3 1225 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 APOBEC2Q9Y235 224 aaKnown RBP10.54□□□□□ -0.72
VMP1-214ENST00000592106 NCKAP1Q9Y2A7 1128 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 MSRB2Q9Y3D2 182 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.54□□□□□ -0.72
VMP1-214ENST00000592106 PI4KAP42356 2102 aa10.54□□□□□ -0.72
VMP1-214ENST00000592106 ADAMTS9Q9P2N4 1935 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 KCNJ18B7U540 433 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 CAPN9O14815 690 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 GJB3O75712 270 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 IGLV3-27P01718 113 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 AFPP02771 609 aaKnown RBP10.53□□□□□ -0.72
VMP1-214ENST00000592106 ZNF883P0CG24 379 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 KRT5P13647 590 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 HLA-EP13747 358 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 CD59P13987 128 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 AFF3P51826 1226 aaKnown RBP10.53□□□□□ -0.72
VMP1-214ENST00000592106 KCNH2Q12809 1159 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 PAK1Q13153 545 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 CDH18Q13634 790 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 TRIP6Q15654 476 aaKnown RBP10.53□□□□□ -0.72
VMP1-214ENST00000592106 MEA1Q16626 185 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 PIK3R6Q5UE93 754 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 RNF219Q5W0B1 726 aaPredicted RBP10.53□□□□□ -0.72
VMP1-214ENST00000592106 TMEM215Q68D42 235 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 ISM2Q6H9L7 571 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 TTI2Q6NXR4 508 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 ENOSF1Q7L5Y1 443 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 KIAA0907Q7Z7F0 614 aaPredicted RBP10.53□□□□□ -0.72
VMP1-214ENST00000592106 FAM124AQ86V42 546 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 KDF1Q8NAX2 398 aaPredicted RBP10.53□□□□□ -0.72
VMP1-214ENST00000592106 OR2I1PQ8NGU4 316 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 TFAP2BQ92481 460 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 MIS12Q9H081 205 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 SGK2Q9HBY8 427 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 ST7Q9NRC1 585 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 TJP2Q9UDY2 1190 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 EIF2B4Q9UI10 523 aaKnown RBP10.53□□□□□ -0.72
VMP1-214ENST00000592106 WASF3Q9UPY6 502 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 TLR6Q9Y2C9 796 aa10.53□□□□□ -0.72
VMP1-214ENST00000592106 KMT2BQ9UMN6 2715 aaPredicted RBP10.53□□□□□ -0.72
VMP1-214ENST00000592106 CNOT1A5YKK6 2376 aaKnown RBP10.53□□□□□ -0.72
VMP1-214ENST00000592106 PIK3R2O00459 728 aa10.52□□□□□ -0.73
VMP1-214ENST00000592106 FLRT2O43155 660 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms