RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 GID8Q9NWU2 228 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 APPL1Q9UKG1 709 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 C2CD2Q9Y426 696 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 HES2Q9Y543 173 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 SNX5Q9Y5X3 404 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 V9GYQ6 96 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 POU5F1Q01860 360 aaKnown RBP17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 WASHC5Q12768 1159 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 PAN2Q504Q3 1202 aaKnown RBP17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 CERS2Q96G23 380 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 SERAC1Q96JX3 654 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 PKD2L2Q9NZM6 624 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 DDHD2O94830 711 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 CYP2B6P20813 491 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 NPY2RP49146 381 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 SHCBP1Q8NEM2 672 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 ZC3H15Q8WU90 426 aaKnown RBP17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 CCDC126Q96EE4 140 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 FBXL18Q96ME1 805 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 PARK7Q99497 189 aaKnown RBP17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 NDFIP2Q9NV92 336 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 NDUFA13Q9P0J0 144 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 CILPO75339 1184 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 ITGA2BP08514 1039 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 GABRB2P47870 512 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 OR6Y1Q8NGX8 325 aa17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 DDX1Q92499 740 aaKnown RBP17.52■□□□□ 0.4
SMARCA4-215ENST00000590574 MARF1Q9Y4F3 1742 aaKnown RBP17.52■□□□□ 0.39
SMARCA4-215ENST00000590574 PHGDHO43175 533 aaKnown RBP17.52■□□□□ 0.39
SMARCA4-215ENST00000590574 MT-CO1P00395 513 aa17.52■□□□□ 0.39
SMARCA4-215ENST00000590574 BPGMP07738 259 aa17.52■□□□□ 0.39
SMARCA4-215ENST00000590574 SATB1Q01826 763 aa17.52■□□□□ 0.39
SMARCA4-215ENST00000590574 TXNRD3NBQ6F5E7 133 aa17.52■□□□□ 0.39
SMARCA4-215ENST00000590574 C10orf107Q8IVU9 208 aa17.52■□□□□ 0.39
SMARCA4-215ENST00000590574 PLD5Q8N7P1 536 aa17.52■□□□□ 0.39
SMARCA4-215ENST00000590574 GLIS1Q8NBF1 620 aa17.52■□□□□ 0.39
SMARCA4-215ENST00000590574 DNAJB3Q8WWF6 145 aa17.52■□□□□ 0.39
SMARCA4-215ENST00000590574 MRPL45Q9BRJ2 306 aaKnown RBP17.52■□□□□ 0.39
SMARCA4-215ENST00000590574 ADNPQ9H2P0 1102 aa17.52■□□□□ 0.39
SMARCA4-215ENST00000590574 RECQL4O94761 1208 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 CETPP11597 493 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 NUMBP49757 651 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 AGKQ53H12 422 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 TSHZ1Q6ZSZ6 1077 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 ZNF410Q86VK4 478 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 BANPQ8N9N5 519 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 THAP11Q96EK4 314 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 L3MBTL3Q96JM7 780 aaPredicted RBP17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 B3GNT5Q9BYG0 378 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 GPAMQ9HCL2 828 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 MRPL42Q9Y6G3 142 aaKnown RBP17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 SYCE1LA8MT33 242 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 ADCYAP1R1P41586 468 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 KCNK10P57789 538 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 TCEAL1Q15170 157 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 HSDL1Q3SXM5 330 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 ISLR2Q6UXK2 745 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 UNC93AQ86WB7 457 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 SYT15Q9BQS2 421 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 MAN1C1Q9NR34 630 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 SYBUQ9NX95 663 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 PHLPP1O60346 1717 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 PEX10O60683 326 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 B3GAT3O94766 335 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 VAPBO95292 243 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 R3HDM1Q15032 1099 aaKnown RBP17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 TREML2Q5T2D2 321 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 BLOC1S5Q8TDH9 187 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 ZNF526Q8TF50 670 aaPredicted RBP17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 C10orf82Q8WW14 230 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 FAM136AQ96C01 138 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 POPDC2Q9HBU9 364 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 BTBD7Q9P203 1132 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 VTI1BQ9UEU0 232 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 PACSIN3Q9UKS6 424 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 TRHDEQ9UKU6 1024 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 ADM5C9JUS6 153 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 PTPN7P35236 360 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 LHX1P48742 406 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 CPT1AP50416 773 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 PKNOX1P55347 436 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 WLSQ5T9L3 541 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 TMC7Q7Z402 723 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 PSTKQ8IV42 348 aaKnown RBP17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 GCNAQ96QF7 691 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 FIZ1Q96SL8 496 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 ZNF536O15090 1300 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 COL18A1P39060 1754 aa17.51■□□□□ 0.39
SMARCA4-215ENST00000590574 UBDO15205 165 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 RHOBTB1O94844 696 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 PIGNO95427 931 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 YY1P25490 414 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 CAPRIN1Q14444 709 aaKnown RBP17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 SPDYAQ5MJ70 313 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 TIGD7Q6NT04 549 aaPredicted RBP17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 TNS4Q8IZW8 715 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 ACMSDQ8TDX5 336 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 DDI1Q8WTU0 396 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 DDX50Q9BQ39 737 aaKnown RBP17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms