RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 PCDHGA1Q9Y5H4 931 aa15.87■□□□□ 0.13
ACTN4-211ENST00000589528 A0A1B0GTQ1 180 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 A0A1W2PPC4 97 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 LRRC72A6NJI9 287 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 K7ELQ4 463 aaPredicted RBP15.86■□□□□ 0.13
ACTN4-211ENST00000589528 PAPSS1O43252 624 aaPredicted RBP15.86■□□□□ 0.13
ACTN4-211ENST00000589528 TBL1XO60907 577 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 LATS1O95835 1130 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 RPL13P26373 211 aaKnown RBP15.86■□□□□ 0.13
ACTN4-211ENST00000589528 ITPKBP27987 946 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 GOLGA7BQ2TAP0 167 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 ARHGAP17Q68EM7 881 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 KRT39Q6A163 491 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 USP30Q70CQ3 517 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 CCDC117Q8IWD4 279 aaPredicted RBP15.86■□□□□ 0.13
ACTN4-211ENST00000589528 SIX6OS1Q8N1H7 587 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.86■□□□□ 0.134e-6■■■□□ 14.9
ACTN4-211ENST00000589528 ZNF557Q8N988 423 aaPredicted RBP15.86■□□□□ 0.13
ACTN4-211ENST00000589528 SLC4A11Q8NBS3 891 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 NDRG1Q92597 394 aaKnown RBP15.86■□□□□ 0.13
ACTN4-211ENST00000589528 EDEM1Q92611 657 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 SLC6A18Q96N87 628 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 OMDQ99983 421 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 PABPC3Q9H361 631 aaKnown RBP15.86■□□□□ 0.13
ACTN4-211ENST00000589528 FBXL12Q9NXK8 326 aa15.86■□□□□ 0.13
ACTN4-211ENST00000589528 TYW5A2RUC4 315 aaKnown RBP15.85■□□□□ 0.13
ACTN4-211ENST00000589528 TK2O00142 265 aa15.85■□□□□ 0.13
ACTN4-211ENST00000589528 YKT6O15498 198 aa15.85■□□□□ 0.13
ACTN4-211ENST00000589528 MSI1O43347 362 aaKnown RBP15.85■□□□□ 0.13
ACTN4-211ENST00000589528 C1SP09871 688 aa15.85■□□□□ 0.13
ACTN4-211ENST00000589528 PSMC2P35998 433 aaKnown RBP15.85■□□□□ 0.13
ACTN4-211ENST00000589528 SLC11A2P49281 568 aa15.85■□□□□ 0.13
ACTN4-211ENST00000589528 ARRB1P49407 418 aaPredicted RBP15.85■□□□□ 0.13
ACTN4-211ENST00000589528 RAD23BP54727 409 aa15.85■□□□□ 0.13
ACTN4-211ENST00000589528 ADIGQ0VDE8 80 aa15.85■□□□□ 0.13
ACTN4-211ENST00000589528 DNAJC3Q13217 504 aa15.85■□□□□ 0.13
ACTN4-211ENST00000589528 PRAMEF14Q5SWL7 426 aa15.85■□□□□ 0.13
ACTN4-211ENST00000589528 PM20D1Q6GTS8 502 aa15.85■□□□□ 0.13
ACTN4-211ENST00000589528 NCEH1Q6PIU2 408 aa15.85■□□□□ 0.13
ACTN4-211ENST00000589528 MFN1Q8IWA4 741 aa15.85■□□□□ 0.13
ACTN4-211ENST00000589528 BAP1Q92560 729 aa15.85■□□□□ 0.13
ACTN4-211ENST00000589528 RSPH9Q9H1X1 276 aaPredicted RBP15.85■□□□□ 0.13
ACTN4-211ENST00000589528 GDF3Q9NR23 364 aa15.85■□□□□ 0.13
ACTN4-211ENST00000589528 NYNRINQ9P2P1 1898 aaKnown RBP15.84■□□□□ 0.13
ACTN4-211ENST00000589528 A0A1W2PP55 124 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 CBX4O00257 560 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 XPO1O14980 1071 aaKnown RBP15.84■□□□□ 0.13
ACTN4-211ENST00000589528 ATXN7O15265 892 aaPredicted RBP15.84■□□□□ 0.13
ACTN4-211ENST00000589528 ACTN4O43707 911 aaKnown RBP15.84■□□□□ 0.13
ACTN4-211ENST00000589528 RNASEH2AO75792 299 aaKnown RBP15.84■□□□□ 0.13
ACTN4-211ENST00000589528 MYL1P05976 194 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 IGHV4-34P06331 123 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 CD38P28907 300 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 GTF2H1P32780 548 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 CD70P32970 193 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 EIF2S3P41091 472 aaKnown RBP15.84■□□□□ 0.13
ACTN4-211ENST00000589528 MXI1P50539 228 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 GALCP54803 685 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 CLDN6P56747 220 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 BST2Q10589 180 aaKnown RBP15.84■□□□□ 0.13
ACTN4-211ENST00000589528 ADAM9Q13443 819 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 SGO2Q562F6 1265 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 SLC45A4Q5BKX6 768 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 HES3Q5TGS1 186 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 BSPRYQ5W0U4 402 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 RFWD3Q6PCD5 774 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 KIAA0907Q7Z7F0 614 aaPredicted RBP15.84■□□□□ 0.13
ACTN4-211ENST00000589528 UNC45BQ8IWX7 931 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 EID2Q8N6I1 236 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 FBXL13Q8NEE6 735 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 COL26A1Q96A83 441 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 FAXDC2Q96IV6 333 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 FCRL3Q96P31 734 aaPredicted RBP15.84■□□□□ 0.13
ACTN4-211ENST00000589528 ABCC13Q9NSE7 274 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 STIM2Q9P246 746 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 STOML2Q9UJZ1 356 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 TSPAN16Q9UKR8 245 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 CFAP45Q9UL16 551 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 CEP83Q9Y592 693 aa15.84■□□□□ 0.13
ACTN4-211ENST00000589528 HELZ2Q9BYK8 2649 aaKnown RBP15.84■□□□□ 0.13
ACTN4-211ENST00000589528 PTPRQQ9UMZ3 2332 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 TULP2O00295 520 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 CAPN9O14815 690 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 MID1O15344 667 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 IRAK2O43187 625 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 STX10O60499 249 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 ASLP04424 464 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 C7P10643 843 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 CD19P15391 556 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 SGSHP51688 502 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 ENPEPQ07075 957 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 TARDBPQ13148 414 aaKnown RBP eCLIP15.83■□□□□ 0.121e-8■■■□□ 15.7
ACTN4-211ENST00000589528 CST6Q15828 149 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 NFIL3Q16649 462 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 MPP7Q5T2T1 576 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 NUGGCQ68CJ6 796 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 DHX40Q8IX18 779 aaKnown RBP15.83■□□□□ 0.12
ACTN4-211ENST00000589528 ZC3H3Q8IXZ2 948 aaKnown RBP15.83■□□□□ 0.12
ACTN4-211ENST00000589528 OR2T34Q8NGX1 318 aa15.83■□□□□ 0.12
ACTN4-211ENST00000589528 WFDC5Q8TCV5 224 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms