RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 GPR78Q96P69 363 aa4.02□□□□□ -1.77
HMGN1P30-201ENST00000589286 SCNM1Q9BWG6 230 aa4.02□□□□□ -1.77
HMGN1P30-201ENST00000589286 TMEM120AQ9BXJ8 343 aa4.02□□□□□ -1.77
HMGN1P30-201ENST00000589286 SFXN1Q9H9B4 322 aa4.02□□□□□ -1.77
HMGN1P30-201ENST00000589286 AGO4Q9HCK5 861 aaKnown RBP4.02□□□□□ -1.77
HMGN1P30-201ENST00000589286 TMEM184CQ9NVA4 438 aa4.02□□□□□ -1.77
HMGN1P30-201ENST00000589286 RAB21Q9UL25 225 aa4.02□□□□□ -1.77
HMGN1P30-201ENST00000589286 TRPC5Q9UL62 973 aaPredicted RBP4.02□□□□□ -1.77
HMGN1P30-201ENST00000589286 SLC12A4Q9UP95 1085 aa4.02□□□□□ -1.77
HMGN1P30-201ENST00000589286 SLC8A2Q9UPR5 921 aa4.02□□□□□ -1.77
HMGN1P30-201ENST00000589286 B3GNT3Q9Y2A9 372 aa4.02□□□□□ -1.77
HMGN1P30-201ENST00000589286 COL3A1P02461 1466 aaPredicted RBP4.02□□□□□ -1.77
HMGN1P30-201ENST00000589286 ZMYM2Q9UBW7 1377 aa4.02□□□□□ -1.77
HMGN1P30-201ENST00000589286 ZNF521Q96K83 1311 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 SLC22A23A1A5C7 686 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 C2CD4BA6NLJ0 364 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 F8W810 466 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 ADAM10O14672 748 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 TLR2O60603 784 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 PPP6R2O75170 966 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 MOSPD3O75425 235 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 ACTL6BO94805 426 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 CYP3A4P08684 503 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 TMEM191BP0C7N4 346 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 TGM2P21980 687 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 HOXD9P28356 352 aaPredicted RBP4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 HOXA7P31268 230 aaPredicted RBP4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 SERPINF1P36955 418 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 TAS2R50P59544 299 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 RPL15P61313 204 aaKnown RBP4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 AP2B1P63010 937 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 TRIM14Q14142 442 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 RPS6KA2Q15349 733 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 PDCD2Q16342 344 aaPredicted RBP4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 BTBD16Q32M84 506 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 TBRG1Q3YBR2 411 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 C11orf87Q6NUJ2 197 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 RHPN2Q8IUC4 686 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 ZFPM2Q8WW38 1151 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 CPT1BQ92523 772 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 HMCESQ96FZ2 354 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 SLC39A13Q96H72 371 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 RPS6KC1Q96S38 1066 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 TUBB6Q9BUF5 446 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 HTATIP2Q9BUP3 242 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 TMEM45AQ9NWC5 275 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 MTMR4Q9NYA4 1195 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 ELOVL5Q9NYP7 299 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 C19orf53Q9UNZ5 99 aaPredicted RBP4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 CNTN6Q9UQ52 1028 aa4.01□□□□□ -1.77
HMGN1P30-201ENST00000589286 ZNF335Q9H4Z2 1342 aaPredicted RBP4□□□□□ -1.77
HMGN1P30-201ENST00000589286 hCG_1642624A0A1W2PR95 340 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 DPPA5A6NC42 116 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 MBD3L5A6NJ08 208 aaPredicted RBP4□□□□□ -1.77
HMGN1P30-201ENST00000589286 M0QYT0 321 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 ACKR2O00590 384 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 TRIM38O00635 465 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 PRPF4O43172 522 aaKnown RBP eCLIP4□□□□□ -1.77
HMGN1P30-201ENST00000589286 CNTN5O94779 1100 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 RFPL3SP0C7P2 107 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 CYP19A1P11511 503 aaPredicted RBP4□□□□□ -1.77
HMGN1P30-201ENST00000589286 GYS1P13807 737 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 SOX2P48431 317 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 PCP4P48539 62 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 SLC37A1P57057 533 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 GALNT1Q10472 559 aaPredicted RBP4□□□□□ -1.77
HMGN1P30-201ENST00000589286 RBMS2Q15434 407 aaKnown RBP4□□□□□ -1.77
HMGN1P30-201ENST00000589286 TRIM60Q495X7 471 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 PAPD7Q5XG87 772 aaKnown RBP4□□□□□ -1.77
HMGN1P30-201ENST00000589286 SLC44A2Q8IWA5 706 aaPredicted RBP4□□□□□ -1.77
HMGN1P30-201ENST00000589286 FCRL4Q96PJ5 515 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 PAGR1Q9BTK6 254 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 TRMOQ9BU70 441 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 ELAC1Q9H777 363 aaKnown RBP4□□□□□ -1.77
HMGN1P30-201ENST00000589286 PAPOLBQ9NRJ5 636 aaKnown RBP4□□□□□ -1.77
HMGN1P30-201ENST00000589286 BAG5Q9UL15 447 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 TNFRSF18Q9Y5U5 241 aa4□□□□□ -1.77
HMGN1P30-201ENST00000589286 SLC38A8A6NNN8 435 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 SOCS2O14508 198 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 UGDHO60701 494 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 ALDOCP09972 364 aaKnown RBP3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 ME1P48163 572 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 CDK7P50613 346 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 KRT72Q14CN4 511 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 GPR162Q16538 588 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 LRIG3Q6UXM1 1119 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 CACNA2D3Q8IZS8 1091 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 MPLKIPQ8TAP9 179 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 SCARB1Q8WTV0 552 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 RUBCNQ92622 972 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 C3orf49Q96BT1 292 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 MECRQ9BV79 373 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 GATA5Q9BWX5 397 aaPredicted RBP3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 SPRTNQ9H040 489 aaPredicted RBP3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 PABPC3Q9H361 631 aaKnown RBP3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 MOV10Q9HCE1 1003 aaKnown RBP3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 MLXIPLQ9NP71 852 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 PRDM8Q9NQV8 689 aa3.99□□□□□ -1.77
HMGN1P30-201ENST00000589286 NDUFAF4Q9P032 175 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms