RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 VRTNQ9H8Y1 702 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 ABCB6Q9NP58 842 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 GDAP2Q9NXN4 497 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 UVRAGQ9P2Y5 699 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 TRIM10Q9UDY6 481 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 AJAP1Q9UKB5 411 aaPredicted RBP8.19□□□□□ -1.1
VMP1-204ENST00000587259 ITGA11Q9UKX5 1188 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 HCN2Q9UL51 889 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 SNX12Q9UMY4 172 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 CNTN6Q9UQ52 1028 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 CAPN6Q9Y6Q1 641 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 NBEAQ8NFP9 2946 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 FASNP49327 2511 aaKnown RBP8.18□□□□□ -1.1
VMP1-204ENST00000587259 GRID2IPA4D2P6 1211 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 ZNF840PA6NDX5 716 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 RCCD1A6NED2 376 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 DDX3XO00571 662 aaKnown RBP eCLIP8.18□□□□□ -1.14e-14■■□□□ 11.6
VMP1-204ENST00000587259 MED7O43513 233 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 KAT7O95251 611 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 MOCS3O95396 460 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 LSM8O95777 96 aaKnown RBP8.18□□□□□ -1.1
VMP1-204ENST00000587259 IRF1P10914 325 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 MBL2P11226 248 aaPredicted RBP8.18□□□□□ -1.1
VMP1-204ENST00000587259 CSRP1P21291 193 aaKnown RBP8.18□□□□□ -1.1
VMP1-204ENST00000587259 PAX3P23760 479 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 PNPLA4P41247 253 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 KIR2DL1P43626 348 aaPredicted RBP8.18□□□□□ -1.1
VMP1-204ENST00000587259 NOP2P46087 812 aaKnown RBP8.18□□□□□ -1.1
VMP1-204ENST00000587259 PGFP49763 221 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 RBP5P82980 135 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 TAF10Q12962 218 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 NR1H3Q13133 447 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 MAP7D1Q3KQU3 841 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 LY6G5CQ5SRR4 150 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 LPCAT2Q7L5N7 544 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 TMEM86AQ8N2M4 240 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 TOP6BLQ8N6T0 577 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 LRRC52Q8N7C0 313 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 PNPLA1Q8N8W4 532 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 MSANTD4Q8NCY6 345 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 SPATA18Q8TC71 538 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 ZNF516Q92618 1163 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 HPDLQ96IR7 371 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 VCPIP1Q96JH7 1222 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 PNKPQ96T60 521 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 MMS19Q96T76 1030 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 ACOX2Q99424 681 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 SELENOOQ9BVL4 669 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 CARD6Q9BX69 1037 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 ZNF518BQ9C0D4 1074 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 PDCL3Q9H2J4 239 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 CYP3A43Q9HB55 503 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 ARHGEF4Q9NR80 690 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 TRPM5Q9NZQ8 1165 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 ZMYM5Q9UJ78 669 aa8.18□□□□□ -1.1
VMP1-204ENST00000587259 TSR3Q9UJK0 312 aaKnown RBP8.18□□□□□ -1.1
VMP1-204ENST00000587259 NOCTQ9UK39 431 aaKnown RBP8.18□□□□□ -1.1
VMP1-204ENST00000587259 HELZP42694 1942 aaKnown RBP8.18□□□□□ -1.1
VMP1-204ENST00000587259 MIF4GDA9UHW6 222 aaKnown RBP8.17□□□□□ -1.1
VMP1-204ENST00000587259 CYP26A1O43174 497 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 PALMO75781 387 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 MTA2O94776 668 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 OAS1P00973 400 aaKnown RBP8.17□□□□□ -1.1
VMP1-204ENST00000587259 CST3P01034 146 aaPredicted RBP8.17□□□□□ -1.1
VMP1-204ENST00000587259 ATP1A1P05023 1023 aaKnown RBP8.17□□□□□ -1.1
VMP1-204ENST00000587259 APODP05090 189 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 ADH5P11766 374 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 GABRG2P18507 467 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 MAOBP27338 520 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 PCSK1P29120 753 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 GNA15P30679 374 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 LHX1P48742 406 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 GALCP54803 685 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 MYO1EQ12965 1108 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 ORC1Q13415 861 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 PPP2R5EQ16537 467 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 ZNF667Q5HYK9 610 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 LYSMD4Q5XG99 296 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 C11orf63Q6NUN7 778 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 DENND5BQ6ZUT9 1274 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 ZNF572Q7Z3I7 529 aaPredicted RBP8.17□□□□□ -1.1
VMP1-204ENST00000587259 PEX26Q7Z412 305 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 LIMS2Q7Z4I7 341 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 PIP4P1Q86T03 277 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 MARCH9Q86YJ5 346 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 SLC41A1Q8IVJ1 513 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 BBS7Q8IWZ6 715 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 PHTF2Q8N3S3 785 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 SCAMP5Q8TAC9 235 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 WHAMMQ8TF30 809 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 ANKRD7Q92527 254 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 TATDN2Q93075 761 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 PBKQ96KB5 322 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 KCNK16Q96T55 309 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 NAP1L3Q99457 506 aaPredicted RBP8.17□□□□□ -1.1
VMP1-204ENST00000587259 NUSAP1Q9BXS6 441 aaKnown RBP8.17□□□□□ -1.1
VMP1-204ENST00000587259 CCSER2Q9H7U1 834 aa8.17□□□□□ -1.1
VMP1-204ENST00000587259 MRPL47Q9HD33 250 aaKnown RBP8.17□□□□□ -1.1
VMP1-204ENST00000587259 CHORDC1Q9UHD1 332 aaPredicted RBP8.17□□□□□ -1.1
VMP1-204ENST00000587259 PILRBQ9UKJ0 227 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms