RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SLC12A6Q9UHW9 1150 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 XPO7Q9UIA9 1087 aaKnown RBP18.35■□□□□ 0.53
TPM4-206ENST00000587201 KHNYNO15037 678 aaKnown RBP18.34■□□□□ 0.53
TPM4-206ENST00000587201 POLR2EP19388 210 aaKnown RBP18.34■□□□□ 0.53
TPM4-206ENST00000587201 TACR2P21452 398 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 PRKCHP24723 683 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 LIMK1P53667 647 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 RPS24P62847 133 aaKnown RBP18.34■□□□□ 0.53
TPM4-206ENST00000587201 SLC6A3Q01959 620 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 MYL5Q02045 173 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 TAF3Q5VWG9 929 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 RAP1GAP2Q684P5 730 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 RNF43Q68DV7 783 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 IL31Q6EBC2 164 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 KIAA0907Q7Z7F0 614 aaPredicted RBP18.34■□□□□ 0.53
TPM4-206ENST00000587201 ADIPOR2Q86V24 386 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 CHSY1Q86X52 802 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 LGI2Q8N0V4 545 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 CARNMT1Q8N4J0 409 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 DEFB119Q8N690 84 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 ANKRD20A12PQ8NF67 263 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 BTN2A3PQ96KV6 586 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 CD93Q9NPY3 652 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 DDIT4Q9NX09 232 aa18.34■□□□□ 0.53
TPM4-206ENST00000587201 F8VZ95 297 aa18.33■□□□□ 0.52
TPM4-206ENST00000587201 ATP5BP06576 529 aaKnown RBP18.33■□□□□ 0.52
TPM4-206ENST00000587201 SLC2A3P11169 496 aa18.33■□□□□ 0.52
TPM4-206ENST00000587201 HLA-EP13747 358 aa18.33■□□□□ 0.52
TPM4-206ENST00000587201 ABCB4P21439 1286 aa18.33■□□□□ 0.52
TPM4-206ENST00000587201 KLK7P49862 253 aa18.33■□□□□ 0.52
TPM4-206ENST00000587201 EIF4EBP2Q13542 120 aaPredicted RBP18.33■□□□□ 0.52
TPM4-206ENST00000587201 CDH18Q13634 790 aa18.33■□□□□ 0.52
TPM4-206ENST00000587201 TMPRSS6Q8IU80 811 aa18.33■□□□□ 0.52
TPM4-206ENST00000587201 ZDHHC17Q8IUH5 632 aa18.33■□□□□ 0.52
TPM4-206ENST00000587201 CFAP52Q8N1V2 620 aa18.33■□□□□ 0.52
TPM4-206ENST00000587201 FIBINQ8TAL6 211 aa18.33■□□□□ 0.52
TPM4-206ENST00000587201 PRCCQ92733 491 aaPredicted RBP18.33■□□□□ 0.52
TPM4-206ENST00000587201 SIPA1Q96FS4 1042 aa18.33■□□□□ 0.52
TPM4-206ENST00000587201 EDEM2Q9BV94 578 aa18.33■□□□□ 0.52
TPM4-206ENST00000587201 MKRN2Q9H000 416 aaKnown RBP18.33■□□□□ 0.52
TPM4-206ENST00000587201 GANQ9H2C0 597 aa18.33■□□□□ 0.52
TPM4-206ENST00000587201 ATXN2Q99700 1313 aaKnown RBP18.32■□□□□ 0.52
TPM4-206ENST00000587201 PLXND1Q9Y4D7 1925 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 MED19A0JLT2 244 aaPredicted RBP18.32■□□□□ 0.52
TPM4-206ENST00000587201 FAM170AA1A519 330 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 KCNU1A8MYU2 1149 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 PATE3B3GLJ2 98 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 F5H5T6 163 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 H0Y626 953 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 NDUFS2O75306 463 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 DAB1O75553 588 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 DLDP09622 509 aaKnown RBP18.32■□□□□ 0.52
TPM4-206ENST00000587201 ACADMP11310 421 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 CDK11BP21127 795 aaKnown RBP18.32■□□□□ 0.52
TPM4-206ENST00000587201 CCR1P32246 355 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 CDH5P33151 784 aaPredicted RBP18.32■□□□□ 0.52
TPM4-206ENST00000587201 NOS2P35228 1153 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 DPP6P42658 865 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 COPB1P53618 953 aaKnown RBP18.32■□□□□ 0.52
TPM4-206ENST00000587201 COPAP53621 1224 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 POLR2FP61218 127 aaKnown RBP18.32■□□□□ 0.52
TPM4-206ENST00000587201 LMAN2Q12907 356 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 NME3Q13232 169 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 STPG1Q5TH74 334 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 SLC26A9Q7LBE3 791 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 NOP9Q86U38 636 aaKnown RBP18.32■□□□□ 0.52
TPM4-206ENST00000587201 METTL3Q86U44 580 aaKnown RBP18.32■□□□□ 0.52
TPM4-206ENST00000587201 SYT12Q8IV01 421 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 ZNF366Q8N895 744 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 DDX1Q92499 740 aaKnown RBP18.32■□□□□ 0.52
TPM4-206ENST00000587201 C18orf8Q96DM3 657 aa18.32■□□□□ 0.52
TPM4-206ENST00000587201 PCMTD1Q96MG8 357 aaPredicted RBP18.32■□□□□ 0.52
TPM4-206ENST00000587201 FAM207AQ9NSI2 230 aaPredicted RBP18.32■□□□□ 0.52
TPM4-206ENST00000587201 LNP1A1A4G5 178 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 LUC7L3O95232 432 aaKnown RBP18.31■□□□□ 0.52
TPM4-206ENST00000587201 MMEP08473 750 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 ITPKAP23677 461 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 RNASE9P60153 205 aaKnown RBP18.31■□□□□ 0.52
TPM4-206ENST00000587201 ZNF33AQ06730 810 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 PTPRNQ16849 979 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 TRIM61Q5EBN2 209 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 ERICH1Q86X53 443 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 CACUL1Q86Y37 369 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 MSANTD4Q8NCY6 345 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 ZNF397Q8NF99 534 aaPredicted RBP18.31■□□□□ 0.52
TPM4-206ENST00000587201 LMLNQ96KR4 655 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 TMEM245Q9H330 911 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 NLRC4Q9NPP4 1024 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 ITM2CQ9NQX7 267 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 TMEM74BQ9NUR3 256 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 LIMA1Q9UHB6 759 aaKnown RBP18.31■□□□□ 0.52
TPM4-206ENST00000587201 NUP205Q92621 2012 aa18.31■□□□□ 0.52
TPM4-206ENST00000587201 M0QYT0 321 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 GFPT2O94808 682 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 LSM8O95777 96 aaKnown RBP18.3■□□□□ 0.52
TPM4-206ENST00000587201 CD6P30203 668 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 MATKP42679 507 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 GABRB2P47870 512 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 ST8SIA6P61647 398 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 IRX4P78413 519 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms