RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 PDCLQ13371 301 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 CAMK2GQ13555 558 aaPredicted RBP11.67□□□□□ -0.54
ACTN4-209ENST00000586538 SLC12A1Q13621 1099 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 PLEKHG6Q3KR16 790 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 RABGAP1LQ5R372 815 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 ACBD5Q5T8D3 534 aaPredicted RBP11.67□□□□□ -0.54
ACTN4-209ENST00000586538 N4BP2L1Q5TBK1 243 aaPredicted RBP11.67□□□□□ -0.54
ACTN4-209ENST00000586538 RNF219Q5W0B1 726 aaPredicted RBP11.67□□□□□ -0.54
ACTN4-209ENST00000586538 MBLAC2Q68D91 279 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 KIAA0907Q7Z7F0 614 aaPredicted RBP11.67□□□□□ -0.54
ACTN4-209ENST00000586538 ZDHHC17Q8IUH5 632 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 FRMD1Q8N878 549 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 MSANTD4Q8NCY6 345 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 FIBINQ8TAL6 211 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 CLEC4CQ8WTT0 213 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 ZSWIM1Q9BR11 485 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 GTPBP2Q9BX10 602 aaKnown RBP11.67□□□□□ -0.54
ACTN4-209ENST00000586538 MKRN2Q9H000 416 aaKnown RBP11.67□□□□□ -0.54
ACTN4-209ENST00000586538 NUP62CLQ9H1M0 184 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 CLSTN2Q9H4D0 955 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 SYNCQ9H7C4 482 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 CAPN10Q9HC96 672 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 TMEM74BQ9NUR3 256 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 RRN3Q9NYV6 651 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 TPX2Q9ULW0 747 aaKnown RBP11.67□□□□□ -0.54
ACTN4-209ENST00000586538 PCDHGC3Q9UN70 934 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 NCKAP1Q9Y2A7 1128 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 CKAP5Q14008 2032 aa11.67□□□□□ -0.54
ACTN4-209ENST00000586538 E5RJQ4 531 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 H0Y626 953 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 LUC7L3O95232 432 aaKnown RBP11.66□□□□□ -0.54
ACTN4-209ENST00000586538 TRIM16O95361 564 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 CER1O95813 267 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 MOCS2O96007 188 aaPredicted RBP11.66□□□□□ -0.54
ACTN4-209ENST00000586538 SRPRAP08240 638 aaKnown RBP11.66□□□□□ -0.54
ACTN4-209ENST00000586538 PRKCHP24723 683 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 CCR1P32246 355 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 COPAP53621 1224 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 SULT2A1Q06520 285 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 ARHGAP44Q17R89 818 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 FAM133BQ5BKY9 247 aaKnown RBP11.66□□□□□ -0.54
ACTN4-209ENST00000586538 MS4A13Q5J8X5 152 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 ZNF776Q68DI1 518 aaPredicted RBP11.66□□□□□ -0.54
ACTN4-209ENST00000586538 RFWD3Q6PCD5 774 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 CHSY1Q86X52 802 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 SLC41A1Q8IVJ1 513 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 CARNMT1Q8N4J0 409 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 MINDY1Q8N5J2 469 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 DNASE2BQ8WZ79 361 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 SHC3Q92529 594 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 RNF34Q969K3 372 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 SLC39A13Q96H72 371 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 PPP1R13BQ96KQ4 1090 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 FCRL2Q96LA5 508 aaPredicted RBP11.66□□□□□ -0.54
ACTN4-209ENST00000586538 CNTNAP3BQ96NU0 1288 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 CRACR2AQ9BSW2 395 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 GPR174Q9BXC1 333 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 CNTNAP3Q9BZ76 1288 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 BTBD1Q9H0C5 482 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 PDCL3Q9H2J4 239 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 TMEM245Q9H330 911 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 FAM204AQ9H8W3 233 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 SGK2Q9HBY8 427 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 DNAAF2Q9NVR5 837 aaKnown RBP11.66□□□□□ -0.54
ACTN4-209ENST00000586538 KIAA1522Q9P206 1035 aaPredicted RBP11.66□□□□□ -0.54
ACTN4-209ENST00000586538 CLEC4EQ9ULY5 219 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 NAALADL1Q9UQQ1 740 aa11.66□□□□□ -0.54
ACTN4-209ENST00000586538 PES1O00541 588 aaKnown RBP11.65□□□□□ -0.54
ACTN4-209ENST00000586538 PAPSS1O43252 624 aaPredicted RBP11.65□□□□□ -0.54
ACTN4-209ENST00000586538 TRUB2O95900 331 aaKnown RBP11.65□□□□□ -0.54
ACTN4-209ENST00000586538 C7P10643 843 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 PON1P27169 355 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 TEAD4Q15561 434 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 DCAF6Q58WW2 860 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 DCAF12L1Q5VU92 463 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 TMEM215Q68D42 235 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 DENND1BQ6P3S1 775 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 C11orf57Q6ZUT1 292 aaPredicted RBP11.65□□□□□ -0.54
ACTN4-209ENST00000586538 USP30Q70CQ3 517 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 SND1Q7KZF4 910 aaKnown RBP eCLIP11.65□□□□□ -0.54
ACTN4-209ENST00000586538 TAC4Q86UU9 113 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 ADIPOR2Q86V24 386 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 DEFB119Q8N690 84 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 C1orf131Q8NDD1 294 aaKnown RBP11.65□□□□□ -0.54
ACTN4-209ENST00000586538 TTC17Q96AE7 1141 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 SKA1Q96BD8 255 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 NDST4Q9H3R1 872 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 STIM2Q9P246 746 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 STAP1Q9ULZ2 295 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 DAAM1Q9Y4D1 1078 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 PCDHB9Q9Y5E1 797 aa11.65□□□□□ -0.54
ACTN4-209ENST00000586538 PI4KAP42356 2102 aa11.65□□□□□ -0.55
ACTN4-209ENST00000586538 CNOT1A5YKK6 2376 aaKnown RBP11.64□□□□□ -0.55
ACTN4-209ENST00000586538 A0A1B0GVM2 712 aa11.64□□□□□ -0.55
ACTN4-209ENST00000586538 TARSL2A2RTX5 802 aaKnown RBP11.64□□□□□ -0.55
ACTN4-209ENST00000586538 TCAF2A6NFQ2 919 aa11.64□□□□□ -0.55
ACTN4-209ENST00000586538 METTL12A8MUP2 240 aa11.64□□□□□ -0.55
ACTN4-209ENST00000586538 KCNU1A8MYU2 1149 aa11.64□□□□□ -0.55
ACTN4-209ENST00000586538 GOLGA6L22H0YM25 854 aa11.64□□□□□ -0.55
ACTN4-209ENST00000586538 BCAT2O15382 392 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms