RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ELF1P32519 619 aa21.11■□□□□ 0.97
ATG4D-204ENST00000586417 NRIP1P48552 1158 aa21.11■□□□□ 0.97
ATG4D-204ENST00000586417 NRLP54845 237 aa21.11■□□□□ 0.97
ATG4D-204ENST00000586417 ARL13BQ3SXY8 428 aa21.11■□□□□ 0.97
ATG4D-204ENST00000586417 UBAP2Q5T6F2 1119 aaKnown RBP21.11■□□□□ 0.97
ATG4D-204ENST00000586417 RFX8Q6ZV50 586 aa21.11■□□□□ 0.97
ATG4D-204ENST00000586417 KREMEN2Q8NCW0 462 aa21.11■□□□□ 0.97
ATG4D-204ENST00000586417 PWWP2AQ96N64 755 aa21.11■□□□□ 0.97
ATG4D-204ENST00000586417 OLFM3Q96PB7 478 aa21.11■□□□□ 0.97
ATG4D-204ENST00000586417 RUFY1Q96T51 708 aa21.11■□□□□ 0.97
ATG4D-204ENST00000586417 TKTL2Q9H0I9 626 aa21.11■□□□□ 0.97
ATG4D-204ENST00000586417 TLE6Q9H808 572 aa21.11■□□□□ 0.97
ATG4D-204ENST00000586417 FARP1Q9Y4F1 1045 aaPredicted RBP21.11■□□□□ 0.97
ATG4D-204ENST00000586417 YIPF1Q9Y548 306 aa21.11■□□□□ 0.97
ATG4D-204ENST00000586417 EEF2KO00418 725 aaKnown RBP21.1■□□□□ 0.97
ATG4D-204ENST00000586417 TUFMP49411 452 aaKnown RBP21.1■□□□□ 0.97
ATG4D-204ENST00000586417 XRCC4Q13426 336 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 DENND5BQ6ZUT9 1274 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 CCDC25Q86WR0 208 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 ZCCHC9Q8N567 271 aaKnown RBP21.1■□□□□ 0.97
ATG4D-204ENST00000586417 OR2W6PQ8NHA6 318 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 SLC22A17Q8WUG5 538 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 FAM161BQ96MY7 647 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 ARHGEF38Q9NXL2 777 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 GMIPQ9P107 970 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 HSFX1Q9UBD0 423 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 INSL5Q9Y5Q6 135 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 CFAP69A5D8W1 941 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 DCLK1O15075 740 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 OPA1O60313 960 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 RNF40O75150 1001 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 RBL1P28749 1068 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 HCAR3P49019 387 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 MORF4L2Q15014 288 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 MSANTD2Q6P1R3 559 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 TSPYL1Q9H0U9 437 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 SFMBT1Q9UHJ3 866 aa21.1■□□□□ 0.97
ATG4D-204ENST00000586417 XIRP2A4UGR9 3374 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 MFSD11O43934 449 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 RTN3O95197 1032 aaPredicted RBP21.09■□□□□ 0.97
ATG4D-204ENST00000586417 NUDT17P0C025 328 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 YWHAQP27348 245 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 RPL10AP62906 217 aaKnown RBP21.09■□□□□ 0.97
ATG4D-204ENST00000586417 ZNF844Q08AG5 666 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 TWF1Q12792 350 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 PAFAH1B3Q15102 231 aaKnown RBP21.09■□□□□ 0.97
ATG4D-204ENST00000586417 ARHGAP18Q8N392 663 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 CPT1BQ92523 772 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 QKIQ96PU8 341 aaKnown RBP eCLIP21.09■□□□□ 0.97
ATG4D-204ENST00000586417 FOXP3Q9BZS1 431 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 MAN1C1Q9NR34 630 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 NUDT5Q9UKK9 219 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 SHOC2Q9UQ13 582 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 SNX10Q9Y5X0 201 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 HCFC2Q9Y5Z7 792 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 DOCK6Q96HP0 2047 aa21.09■□□□□ 0.97
ATG4D-204ENST00000586417 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.08■□□□□ 0.97
ATG4D-204ENST00000586417 POLR3GO15318 223 aaPredicted RBP21.08■□□□□ 0.97
ATG4D-204ENST00000586417 KCNN4O15554 427 aa21.08■□□□□ 0.97
ATG4D-204ENST00000586417 MSI1O43347 362 aaKnown RBP21.08■□□□□ 0.97
ATG4D-204ENST00000586417 RIPK2O43353 540 aa21.08■□□□□ 0.97
ATG4D-204ENST00000586417 C8AP07357 584 aa21.08■□□□□ 0.97
ATG4D-204ENST00000586417 DUSP6Q16828 381 aa21.08■□□□□ 0.97
ATG4D-204ENST00000586417 SLC45A4Q5BKX6 768 aa21.08■□□□□ 0.97
ATG4D-204ENST00000586417 BRMS1LQ5PSV4 323 aa21.08■□□□□ 0.97
ATG4D-204ENST00000586417 CDKL3Q8IVW4 592 aaPredicted RBP21.08■□□□□ 0.97
ATG4D-204ENST00000586417 LRRN4Q8WUT4 740 aa21.08■□□□□ 0.97
ATG4D-204ENST00000586417 PRCCQ92733 491 aaPredicted RBP21.08■□□□□ 0.97
ATG4D-204ENST00000586417 ARL8AQ96BM9 186 aa21.08■□□□□ 0.97
ATG4D-204ENST00000586417 CDC42EP4Q9H3Q1 356 aaKnown RBP21.08■□□□□ 0.97
ATG4D-204ENST00000586417 DNAJC17Q9NVM6 304 aaKnown RBP21.08■□□□□ 0.97
ATG4D-204ENST00000586417 COMMD8Q9NX08 183 aa21.08■□□□□ 0.97
ATG4D-204ENST00000586417 MAFFQ9ULX9 164 aa21.08■□□□□ 0.97
ATG4D-204ENST00000586417 NDC80O14777 642 aa21.08■□□□□ 0.96
ATG4D-204ENST00000586417 RFPL2O75678 378 aa21.08■□□□□ 0.96
ATG4D-204ENST00000586417 ALDH1A3P47895 512 aa21.08■□□□□ 0.96
ATG4D-204ENST00000586417 ZNF135P52742 658 aaPredicted RBP21.08■□□□□ 0.96
ATG4D-204ENST00000586417 ADGRE1Q14246 886 aa21.08■□□□□ 0.96
ATG4D-204ENST00000586417 TTMPQ5BVD1 217 aa21.08■□□□□ 0.96
ATG4D-204ENST00000586417 TRMT10CQ7L0Y3 403 aaKnown RBP21.08■□□□□ 0.96
ATG4D-204ENST00000586417 RELL1Q8IUW5 271 aa21.08■□□□□ 0.96
ATG4D-204ENST00000586417 NAT8LQ8N9F0 302 aa21.08■□□□□ 0.96
ATG4D-204ENST00000586417 VN1R2Q8NFZ6 395 aa21.08■□□□□ 0.96
ATG4D-204ENST00000586417 RNF34Q969K3 372 aa21.08■□□□□ 0.96
ATG4D-204ENST00000586417 FBXO32Q969P5 355 aa21.08■□□□□ 0.96
ATG4D-204ENST00000586417 OSBPL2Q9H1P3 480 aa21.08■□□□□ 0.96
ATG4D-204ENST00000586417 IGFLR1Q9H665 355 aa21.08■□□□□ 0.96
ATG4D-204ENST00000586417 OR12D3Q9UGF7 316 aa21.08■□□□□ 0.96
ATG4D-204ENST00000586417 C5orf42Q9H799 3197 aa21.07■□□□□ 0.96
ATG4D-204ENST00000586417 TMEM265A0A087WTH1 108 aa21.07■□□□□ 0.96
ATG4D-204ENST00000586417 SLC38A8A6NNN8 435 aa21.07■□□□□ 0.96
ATG4D-204ENST00000586417 ERCC2P18074 760 aa21.07■□□□□ 0.96
ATG4D-204ENST00000586417 TPI1P60174 286 aa21.07■□□□□ 0.96
ATG4D-204ENST00000586417 SLC29A2Q14542 456 aa21.07■□□□□ 0.96
ATG4D-204ENST00000586417 PPP2R5DQ14738 602 aa21.07■□□□□ 0.96
ATG4D-204ENST00000586417 CEP85LQ5SZL2 805 aa21.07■□□□□ 0.96
ATG4D-204ENST00000586417 ANKRD22Q5VYY1 191 aa21.07■□□□□ 0.96
ATG4D-204ENST00000586417 PCGF5Q86SE9 256 aa21.07■□□□□ 0.96
ATG4D-204ENST00000586417 PPIL6Q8IXY8 311 aa21.07■□□□□ 0.96
ATG4D-204ENST00000586417 CCDC33Q8N5R6 958 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms