RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 DUSP12Q9UNI6 340 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.08□□□□□ -0.16
VMP1-203ENST00000586245 SNX10Q9Y5X0 201 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 E9PAM4 449 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 NEDD8-MDP1E9PL57 170 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 PSTPIP1O43586 416 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 NARSO43776 548 aaKnown RBP14.07□□□□□ -0.16
VMP1-203ENST00000586245 CREB3O43889 395 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 KIF5CO60282 957 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 TBL1XO60907 577 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 SRGAP2O75044 1071 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 FTCDO95954 541 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 CYP17A1P05093 508 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 MSNP26038 577 aaKnown RBP14.07□□□□□ -0.16
VMP1-203ENST00000586245 L1CAMP32004 1257 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 ZNF135P52742 658 aaPredicted RBP14.07□□□□□ -0.16
VMP1-203ENST00000586245 NRG1Q02297 640 aaPredicted RBP14.07□□□□□ -0.16
VMP1-203ENST00000586245 GAD2Q05329 585 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 KRT81Q14533 505 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 TTC39BQ5VTQ0 682 aaPredicted RBP14.07□□□□□ -0.16
VMP1-203ENST00000586245 TXNRD3NBQ6F5E7 133 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 FBXL22Q6P050 247 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 RHBDF2Q6PJF5 856 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 TMEM25Q86YD3 366 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 CCDC117Q8IWD4 279 aaPredicted RBP14.07□□□□□ -0.16
VMP1-203ENST00000586245 PYROXD2Q8N2H3 581 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 HJURPQ8NCD3 748 aaPredicted RBP14.07□□□□□ -0.16
VMP1-203ENST00000586245 TTC8Q8TAM2 541 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 UBE2Q2Q8WVN8 375 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 TBC1D31Q96DN5 1066 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 UHRF1Q96T88 793 aaPredicted RBP14.07□□□□□ -0.16
VMP1-203ENST00000586245 SLC2A4RGQ9NR83 387 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 DDX56Q9NY93 547 aaKnown RBP14.07□□□□□ -0.16
VMP1-203ENST00000586245 GTSE1Q9NYZ3 720 aa14.07□□□□□ -0.16
VMP1-203ENST00000586245 KIF26AQ9ULI4 1882 aaPredicted RBP14.06□□□□□ -0.16
VMP1-203ENST00000586245 TCF20Q9UGU0 1960 aaKnown RBP14.06□□□□□ -0.16
VMP1-203ENST00000586245 CCDC66A2RUB6 948 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 USP27XA6NNY8 438 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 ARNTLO00327 626 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 GFRA2O00451 464 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 HOXC11O43248 304 aaPredicted RBP14.06□□□□□ -0.16
VMP1-203ENST00000586245 HTR7P34969 479 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 ARL4AP40617 200 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 CDH6P55285 790 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 AMPD2Q01433 879 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 DPYSL2Q16555 572 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 CA9Q16790 459 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 PPP6R3Q5H9R7 873 aaPredicted RBP14.06□□□□□ -0.16
VMP1-203ENST00000586245 MPP7Q5T2T1 576 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 RWDD4Q6NW29 188 aaKnown RBP14.06□□□□□ -0.16
VMP1-203ENST00000586245 C14orf80Q86SX3 495 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 NT5DC3Q86UY8 548 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 MAP7D3Q8IWC1 876 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 KCTD6Q8NC69 237 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 BHMTQ93088 406 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 PRICKLE1Q96MT3 831 aaPredicted RBP14.06□□□□□ -0.16
VMP1-203ENST00000586245 XPO6Q96QU8 1125 aaKnown RBP14.06□□□□□ -0.16
VMP1-203ENST00000586245 KCTD15Q96SI1 283 aaPredicted RBP14.06□□□□□ -0.16
VMP1-203ENST00000586245 KCND1Q9NSA2 647 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 MARK1Q9P0L2 795 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 STIM2Q9P246 746 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 PPARGC1AQ9UBK2 798 aaKnown RBP14.06□□□□□ -0.16
VMP1-203ENST00000586245 ZKSCAN5Q9Y2L8 839 aa14.06□□□□□ -0.16
VMP1-203ENST00000586245 UNC80Q8N2C7 3258 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 A0A1B0GVM2 712 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 TCAF2A6NFQ2 919 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 DRGXA6NNA5 263 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 MIF4GDA9UHW6 222 aaKnown RBP14.05□□□□□ -0.16
VMP1-203ENST00000586245 FAM72CH0Y354 149 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 H3BRJ5 948 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 EEF2KO00418 725 aaKnown RBP14.05□□□□□ -0.16
VMP1-203ENST00000586245 DAPK3O43293 454 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 LRIG2O94898 1065 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 PENKP01210 267 aaPredicted RBP14.05□□□□□ -0.16
VMP1-203ENST00000586245 KRT1P04264 644 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 TYRP14679 529 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 CTNNA2P26232 953 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 EPHB2P29323 1055 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 CTNNA1P35221 906 aaKnown RBP14.05□□□□□ -0.16
VMP1-203ENST00000586245 SGSHP51688 502 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 TPI1P60174 286 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 RPS24P62847 133 aaKnown RBP14.05□□□□□ -0.16
VMP1-203ENST00000586245 PDK2Q15119 407 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 ATP13A4Q4VNC1 1196 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 FAM72AQ5TYM5 149 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 MANEALQ5VSG8 457 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 FYB2Q5VWT5 728 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 FAM72DQ6L9T8 149 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 FAM72BQ86X60 149 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 UBALD2Q8IYN6 164 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 ZNF683Q8IZ20 524 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 CFAP52Q8N1V2 620 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 UBL4BQ8N7F7 174 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 ZNF557Q8N988 423 aaPredicted RBP14.05□□□□□ -0.16
VMP1-203ENST00000586245 CD101Q93033 1021 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 IGSF8Q969P0 613 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 EXOC4Q96A65 974 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 MYEOVQ96EZ4 313 aa14.05□□□□□ -0.16
VMP1-203ENST00000586245 NECAB3Q96P71 396 aaPredicted RBP14.05□□□□□ -0.16
VMP1-203ENST00000586245 MAGEB5Q9BZ81 275 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms