RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 CHADO15335 359 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 SPAG6O75602 509 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 ENDOD1O94919 500 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 ZWINTO95229 277 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 KCNE1P15382 129 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 NR2C2P49116 596 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 NOMO2Q5JPE7 1267 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 ATG16L1Q676U5 607 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 LINC01465Q8N7H1 131 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 TRPV1Q8NER1 839 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 GIMAP7Q8NHV1 300 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 TEKT4Q8WW24 435 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 RABGEF1Q9UJ41 708 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 HAO1Q9UJM8 370 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 DIAPH2O60879 1101 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 ALDH2P05091 517 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 GABRB2P47870 512 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 C6orf163Q5TEZ5 329 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 STK32AQ8WU08 396 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 FICDQ9BVA6 458 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 TRPC7Q9HCX4 862 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 NT5MQ9NPB1 228 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 USH1CQ9Y6N9 552 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 CLUHO75153 1309 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 UNCXA6NJT0 531 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 ZBBXA8MT70 800 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 HAUS5O94927 633 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 HSPA4LO95757 839 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 ABHD2P08910 425 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 WARSP23381 471 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 CCR1P32246 355 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 WDR4P57081 412 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 HTRA3P83110 453 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 ARHGEF6Q15052 776 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 UNC5AQ6ZN44 842 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 TAC4Q86UU9 113 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 C3orf58Q8NDZ4 430 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 ATXN2LQ8WWM7 1075 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 ALKBH8Q96BT7 664 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 SENP6Q9GZR1 1112 aaPredicted RBP12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 CNGB3Q9NQW8 809 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 KLC4Q9NSK0 619 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 TRIM33Q9UPN9 1127 aa12.79□□□□□ -0.36
SMARCA4-208ENST00000585799 DCTN3O75935 186 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 KCNA4P22459 653 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 FOXN2P32314 431 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 ACLYP53396 1101 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 ALDH18A1P54886 795 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 SLC10A2Q12908 348 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 USP10Q14694 798 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 STRA8Q7Z7C7 330 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 SMC1BQ8NDV3 1235 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 KCNV2Q8TDN2 545 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 DQX1Q8TE96 717 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 SH3TC2Q8TF17 1288 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 E2F7Q96AV8 911 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 ACSS2Q9NR19 701 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 SMPD4Q9NXE4 827 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 FAM72CH0Y354 149 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 LRIG2O94898 1065 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 MAXP61244 160 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 KDSRQ06136 332 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 STX3Q13277 289 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 EML3Q32P44 896 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 FAM72AQ5TYM5 149 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 FAM72DQ6L9T8 149 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 NLRP9Q7RTR0 991 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 OTOP3Q7RTS5 596 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 FAM72BQ86X60 149 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 DBF4BQ8NFT6 615 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 TMEM109Q9BVC6 243 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 OSBPL7Q9BZF2 842 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 TXLNGQ9NUQ3 528 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 SYBUQ9NX95 663 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 HEY2Q9UBP5 337 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 TRDMT1O14717 391 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 BUD23O43709 281 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 OPHN1O60890 802 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 ITGB1P05556 798 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 SLC10A3P09131 477 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 SKIP12755 728 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 RPL9P32969 192 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 SERPINB4P48594 390 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 RASSF2P50749 326 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 CERCAMQ5T4B2 595 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 MTDHQ86UE4 582 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 TRIM42Q8IWZ5 723 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 TMEM237Q96Q45 408 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 GDAP2Q9NXN4 497 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 DSEQ9UL01 958 aa12.78□□□□□ -0.36
SMARCA4-208ENST00000585799 TCRBV5S1A1TA0A578 114 aa12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 CXorf49A8MYA2 514 aaPredicted RBP12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 ITGBL1O95965 494 aaPredicted RBP12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 SLC5A3P53794 718 aa12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 GRIK3Q13003 919 aa12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 PACS2Q86VP3 889 aa12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 ZNF280BQ86YH2 543 aa12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 CCDC117Q8IWD4 279 aaPredicted RBP12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 HIPK4Q8NE63 616 aa12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 STMN2Q93045 179 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms