RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	DEPDC1B	Q8WUY9	529 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SPATA13	Q96N96	652 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ARHGEF4	Q9NR80	690 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NMRK1	Q9NWW6	199 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	LNPEP	Q9UIQ6	1025 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	LRCH1	Q9Y2L9	728 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	HACD1	B0YJ81	288 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377		I3L4J1	428 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	GSTT1	P30711	240 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CDK16	Q00536	496 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MFSD10	Q14728	455 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CASC4	Q6P4E1	433 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TRIM42	Q8IWZ5	723 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MKS1	Q9NXB0	559 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	COX16	Q9P0S2	106 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	BLOC1S6	Q9UL45	172 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	HMX2	A2RU54	273 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MFSD11	O43934	449 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	FDFT1	P37268	417 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	LILRA4	P59901	499 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TMPRSS15	P98073	1019 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	RCN2	Q14257	317 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	UBXN11	Q5T124	520 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	LIMS2	Q7Z4I7	341 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NDUFAF2	Q8N183	169 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SKA1	Q96BD8	255 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	LENG1	Q96BZ8	264 aa	Predicted RBP	13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	WDR27	A2RRH5	827 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	C2orf71	A6NGG8	1288 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	DNAJC6	O75061	913 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ENTPD5	O75356	428 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MYL2	P10916	166 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SERPINB9	P50453	376 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CACNA2D1	P54289	1103 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PITX1	P78337	314 aa	Predicted RBP	13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	FAM110C	Q1W6H9	321 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	XKR4	Q5GH76	650 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	OSTM1	Q86WC4	334 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CCNJL	Q8IV13	435 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	HACE1	Q8IYU2	909 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	COLGALT1	Q8NBJ5	622 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NETO2	Q8NC67	525 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	E2F7	Q96AV8	911 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PARK7	Q99497	189 aa	Known RBP	13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	HNRNPAB	Q99729	332 aa	Known RBP	13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	DUSP16	Q9BY84	665 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MOCS1	Q9NZB8	636 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	GNE	Q9Y223	722 aa	Known RBP	13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	FAM237B	A0A1B0GVD1	139 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CLDN5	O00501	218 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TREH	O43280	583 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	DAB1	O75553	588 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	STK10	O94804	968 aa	Known RBP	13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	AP1B1	Q10567	949 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	BST1	Q10588	318 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MTA1	Q13330	715 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	WASHC2D	Q5SRD0	308 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ATG16L1	Q676U5	607 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TLK2	Q86UE8	772 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PSTK	Q8IV42	348 aa	Known RBP	13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PDCD7	Q8N8D1	485 aa	Known RBP	13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	RNF139	Q8WU17	664 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TUBB6	Q9BUF5	446 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TMPRSS4	Q9NRS4	437 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ARL8B	Q9NVJ2	186 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ATXN10	Q9UBB4	475 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CLEC11A	Q9Y240	323 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	IPP	Q9Y573	584 aa		13.6	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CCDC195	A0A1B0GUA6	201 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	UNCX	A6NJT0	531 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377		H3BRJ5	948 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	RNF103	O00237	685 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CYB561D2	O14569	222 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CCDC22	O60826	627 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MLN	P12872	115 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NPR3	P17342	541 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ACAT1	P24752	427 aa	Known RBP	13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CRADD	P78560	199 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CHI3L2	Q15782	390 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	OTUD1	Q5VV17	481 aa	Predicted RBP	13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NUDCD3	Q8IVD9	361 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TOP6BL	Q8N6T0	577 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ARRDC4	Q8NCT1	418 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	P2RY11	Q96G91	374 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PRR11	Q96HE9	360 aa	Predicted RBP	13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	C7orf26	Q96N11	449 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TSPAN18	Q96SJ8	248 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TLE6	Q9H808	572 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	DCLRE1B	Q9H816	532 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	LRRC4	Q9HBW1	653 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PREB	Q9HCU5	417 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	GALNT8	Q9NY28	637 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SIRPG	Q9P1W8	387 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SDR42E2	A6NKP2	422 aa		13.59	□□□□□ -0.23

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