RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 BCAT1P54687 386 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 CETN1Q12798 172 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 TARDBPQ13148 414 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCDC47-206ENST00000584112 SGO2Q562F6 1265 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 SPDYCQ5MJ68 293 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 ALLCQ8N6M5 410 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 TERB1Q8NA31 727 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 IL17RCQ8NAC3 791 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 ANKRD52Q8NB46 1076 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 TXNDC5Q8NBS9 432 aaKnown RBP11.66□□□□□ -0.54
CCDC47-206ENST00000584112 TATDN2Q93075 761 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 WBP2Q969T9 261 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 SLC35C1Q96A29 364 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 NMUR1Q9HB89 426 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 MARK1Q9P0L2 795 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 WDR35Q9P2L0 1181 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 HESX1Q9UBX0 185 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 ZNF510Q9Y2H8 683 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 BICDL2A1A5D9 508 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 NEDD8-MDP1E9PL57 170 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 PMM2O15305 246 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 CACNG3O60359 315 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 NDUFV2P19404 249 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 KIR2DL1P43626 348 aaPredicted RBP11.65□□□□□ -0.54
CCDC47-206ENST00000584112 COG7P83436 770 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 VAC14Q08AM6 782 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 MESP2Q0VG99 397 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 IGFBP7Q16270 282 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 TBC1D25Q3MII6 688 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 CCDC40Q4G0X9 1142 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 RAB41Q5JT25 222 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 GRAMD4Q6IC98 578 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 FOXR2Q6PJQ5 311 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 RABEPKQ7Z6M1 372 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 SCD5Q86SK9 330 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 PIGZQ86VD9 579 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 TMEM25Q86YD3 366 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 PHTF2Q8N3S3 785 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 NAT16Q8N8M0 369 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 BBS2Q9BXC9 721 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 DCLK3Q9C098 648 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 TM7SF3Q9NS93 570 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 STARD5Q9NSY2 213 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 DNAJC17Q9NVM6 304 aaKnown RBP11.65□□□□□ -0.54
CCDC47-206ENST00000584112 BCCIPQ9P287 314 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCDC47-206ENST00000584112 NUDT5Q9UKK9 219 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 MAN1B1Q9UKM7 699 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 KIAA1257Q9ULG3 409 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 MED13Q9UHV7 2174 aa11.65□□□□□ -0.54
CCDC47-206ENST00000584112 SGK1O00141 431 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 XPO1O14980 1071 aaKnown RBP11.64□□□□□ -0.55
CCDC47-206ENST00000584112 MDM4O15151 490 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 P4HA2O15460 535 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 AP5Z1O43299 807 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 GREM1O60565 184 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 STC2O76061 302 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 VDRP11473 427 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 TYRP14679 529 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 CD19P15391 556 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 ACTN2P35609 894 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 CHKAP35790 457 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 FMO5P49326 533 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 UCNP55089 124 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 BST2Q10589 180 aaKnown RBP11.64□□□□□ -0.55
CCDC47-206ENST00000584112 LRMPQ12912 555 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 BYSLQ13895 437 aaKnown RBP11.64□□□□□ -0.55
CCDC47-206ENST00000584112 GOLGA7BQ2TAP0 167 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 C10orf76Q5T2E6 689 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 ZNF787Q6DD87 383 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 ISM2Q6H9L7 571 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 KLHL10Q6JEL2 608 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 Q6ZNB5 142 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 TPGS1Q6ZTW0 290 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 RSRC2Q7L4I2 434 aaKnown RBP11.64□□□□□ -0.55
CCDC47-206ENST00000584112 MIB1Q86YT6 1006 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 SFTPA1Q8IWL2 248 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 SRRM1Q8IYB3 904 aaKnown RBP11.64□□□□□ -0.55
CCDC47-206ENST00000584112 FAM26EQ8N5C1 309 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 HMGB4Q8WW32 186 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 NANOS1Q8WY41 292 aaKnown RBP11.64□□□□□ -0.55
CCDC47-206ENST00000584112 HSPA12BQ96MM6 686 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 NT5C1BQ96P26 610 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 NRSN2Q9GZP1 204 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 GAREM1Q9H706 876 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 OLA1Q9NTK5 396 aaKnown RBP11.64□□□□□ -0.55
CCDC47-206ENST00000584112 RASAL2Q9UJF2 1139 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 TSPAN16Q9UKR8 245 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 STRIP2Q9ULQ0 834 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 STARD13Q9Y3M8 1113 aa11.64□□□□□ -0.55
CCDC47-206ENST00000584112 NYNRINQ9P2P1 1898 aaKnown RBP11.63□□□□□ -0.55
CCDC47-206ENST00000584112 ZBTB24O43167 697 aaPredicted RBP11.63□□□□□ -0.55
CCDC47-206ENST00000584112 TNFSF14O43557 240 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 GNA14O95837 355 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 ZBED1O96006 694 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 PAEPP09466 180 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 SETSIPP0DME0 302 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 CHRM1P11229 460 aaPredicted RBP11.63□□□□□ -0.55
CCDC47-206ENST00000584112 CD44P16070 742 aaKnown RBP11.63□□□□□ -0.55
CCDC47-206ENST00000584112 MAOBP27338 520 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 TKTL1P51854 596 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms