RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 COG7P83436 770 aa21.39■■□□□ 1.01
SRSF1-206ENST00000583741 ZNF394Q53GI3 561 aa21.39■■□□□ 1.01
SRSF1-206ENST00000583741 FKBP15Q5T1M5 1219 aa21.39■■□□□ 1.01
SRSF1-206ENST00000583741 DRC7Q8IY82 874 aa21.39■■□□□ 1.01
SRSF1-206ENST00000583741 BAHD1Q8TBE0 780 aaPredicted RBP21.39■■□□□ 1.01
SRSF1-206ENST00000583741 MDM1Q8TC05 714 aa21.39■■□□□ 1.01
SRSF1-206ENST00000583741 UCMAQ8WVF2 138 aa21.39■■□□□ 1.01
SRSF1-206ENST00000583741 SLC35C1Q96A29 364 aa21.39■■□□□ 1.01
SRSF1-206ENST00000583741 CDK5RAP1Q96SZ6 601 aaKnown RBP21.39■■□□□ 1.01
SRSF1-206ENST00000583741 CCDC86Q9H6F5 360 aaKnown RBP21.39■■□□□ 1.01
SRSF1-206ENST00000583741 TM7SF3Q9NS93 570 aa21.39■■□□□ 1.01
SRSF1-206ENST00000583741 TOR4AQ9NXH8 423 aa21.39■■□□□ 1.01
SRSF1-206ENST00000583741 ZNF883P0CG24 379 aa21.38■■□□□ 1.01
SRSF1-206ENST00000583741 OXTRP30559 389 aa21.38■■□□□ 1.01
SRSF1-206ENST00000583741 MATKP42679 507 aa21.38■■□□□ 1.01
SRSF1-206ENST00000583741 EIF4HQ15056 248 aaKnown RBP21.38■■□□□ 1.01
SRSF1-206ENST00000583741 HLA-BQ31612 363 aa21.38■■□□□ 1.01
SRSF1-206ENST00000583741 DCLK3Q9C098 648 aa21.38■■□□□ 1.01
SRSF1-206ENST00000583741 CIPCQ9C0C6 399 aa21.38■■□□□ 1.01
SRSF1-206ENST00000583741 GOLGA4Q13439 2230 aaKnown RBP21.37■■□□□ 1.01
SRSF1-206ENST00000583741 CER1O95813 267 aa21.37■■□□□ 1.01
SRSF1-206ENST00000583741 AFPP02771 609 aaKnown RBP21.37■■□□□ 1.01
SRSF1-206ENST00000583741 EPHX1P07099 455 aa21.37■■□□□ 1.01
SRSF1-206ENST00000583741 DEKP35659 375 aaKnown RBP21.37■■□□□ 1.01
SRSF1-206ENST00000583741 KCNH2Q12809 1159 aa21.37■■□□□ 1.01
SRSF1-206ENST00000583741 COL28A1Q2UY09 1125 aa21.37■■□□□ 1.01
SRSF1-206ENST00000583741 FAM124AQ86V42 546 aa21.37■■□□□ 1.01
SRSF1-206ENST00000583741 VSTM4Q8IW00 320 aa21.37■■□□□ 1.01
SRSF1-206ENST00000583741 CPXM2Q8N436 756 aa21.37■■□□□ 1.01
SRSF1-206ENST00000583741 PPP1R9BQ96SB3 815 aa21.37■■□□□ 1.01
SRSF1-206ENST00000583741 NUP58Q9BVL2 599 aa21.37■■□□□ 1.01
SRSF1-206ENST00000583741 MMRN2Q9H8L6 949 aa21.37■■□□□ 1.01
SRSF1-206ENST00000583741 MARCH2Q9P0N8 246 aa21.37■■□□□ 1.01
SRSF1-206ENST00000583741 A0A1B0GVT2 93 aa21.36■■□□□ 1.01
SRSF1-206ENST00000583741 HLA-EP13747 358 aa21.36■■□□□ 1.01
SRSF1-206ENST00000583741 SERPINA13PQ6UXR4 307 aa21.36■■□□□ 1.01
SRSF1-206ENST00000583741 FAM217AQ8IXS0 508 aa21.36■■□□□ 1.01
SRSF1-206ENST00000583741 SPC24Q8NBT2 197 aa21.36■■□□□ 1.01
SRSF1-206ENST00000583741 DDI1Q8WTU0 396 aa21.36■■□□□ 1.01
SRSF1-206ENST00000583741 KIAA1522Q9P206 1035 aaPredicted RBP21.36■■□□□ 1.01
SRSF1-206ENST00000583741 SLC12A8A0AV02 714 aa21.35■■□□□ 1.01
SRSF1-206ENST00000583741 CYBBP04839 570 aa21.35■■□□□ 1.01
SRSF1-206ENST00000583741 ATXN1LP0C7T5 689 aaKnown RBP21.35■■□□□ 1.01
SRSF1-206ENST00000583741 ACADMP11310 421 aa21.35■■□□□ 1.01
SRSF1-206ENST00000583741 PBX1P40424 430 aa21.35■■□□□ 1.01
SRSF1-206ENST00000583741 ENPEPQ07075 957 aa21.35■■□□□ 1.01
SRSF1-206ENST00000583741 RAB41Q5JT25 222 aa21.35■■□□□ 1.01
SRSF1-206ENST00000583741 DBX2Q6ZNG2 339 aa21.35■■□□□ 1.01
SRSF1-206ENST00000583741 RSRC2Q7L4I2 434 aaKnown RBP21.35■■□□□ 1.01
SRSF1-206ENST00000583741 TMC6Q7Z403 805 aa21.35■■□□□ 1.01
SRSF1-206ENST00000583741 PDZD3Q86UT5 571 aa21.35■■□□□ 1.01
SRSF1-206ENST00000583741 PIGZQ86VD9 579 aa21.35■■□□□ 1.01
SRSF1-206ENST00000583741 HEXIM2Q96MH2 286 aaKnown RBP21.35■■□□□ 1.01
SRSF1-206ENST00000583741 C6orf106Q9H6K1 298 aaPredicted RBP21.35■■□□□ 1.01
SRSF1-206ENST00000583741 BTBD3Q9Y2F9 522 aa21.35■■□□□ 1.01
SRSF1-206ENST00000583741 TP53BP1Q12888 1972 aaPredicted RBP21.35■■□□□ 1.01
SRSF1-206ENST00000583741 A0A1W2PQC6 194 aa21.34■■□□□ 1.01
SRSF1-206ENST00000583741 CSNK1EP49674 416 aaKnown RBP21.34■■□□□ 1.01
SRSF1-206ENST00000583741 MCCD1P59942 119 aaPredicted RBP21.34■■□□□ 1.01
SRSF1-206ENST00000583741 YWHAGP61981 247 aaKnown RBP eCLIP21.34■■□□□ 1.01
SRSF1-206ENST00000583741 SOWAHCQ53LP3 525 aaPredicted RBP21.34■■□□□ 1.01
SRSF1-206ENST00000583741 SPECC1LQ69YQ0 1117 aa21.34■■□□□ 1.01
SRSF1-206ENST00000583741 IL27RAQ6UWB1 636 aa21.34■■□□□ 1.01
SRSF1-206ENST00000583741 MARCH9Q86YJ5 346 aa21.34■■□□□ 1.01
SRSF1-206ENST00000583741 SLC4A11Q8NBS3 891 aa21.34■■□□□ 1.01
SRSF1-206ENST00000583741 SNX19Q92543 992 aa21.34■■□□□ 1.01
SRSF1-206ENST00000583741 ARID3AQ99856 593 aa21.34■■□□□ 1.01
SRSF1-206ENST00000583741 SLC2A11Q9BYW1 496 aa21.34■■□□□ 1.01
SRSF1-206ENST00000583741 STRIP2Q9ULQ0 834 aa21.34■■□□□ 1.01
SRSF1-206ENST00000583741 RAXQ9Y2V3 346 aa21.34■■□□□ 1.01
SRSF1-206ENST00000583741 STX10O60499 249 aa21.33■■□□□ 1.01
SRSF1-206ENST00000583741 DKK1O94907 266 aa21.33■■□□□ 1.01
SRSF1-206ENST00000583741 HOXD9P28356 352 aaPredicted RBP21.33■■□□□ 1.01
SRSF1-206ENST00000583741 ACSL1P33121 698 aa21.33■■□□□ 1.01
SRSF1-206ENST00000583741 CAMK2GQ13555 558 aaPredicted RBP21.33■■□□□ 1.01
SRSF1-206ENST00000583741 BHLHA9Q7RTU4 235 aa21.33■■□□□ 1.01
SRSF1-206ENST00000583741 TMPRSS7Q7RTY8 843 aa21.33■■□□□ 1.01
SRSF1-206ENST00000583741 ZNF366Q8N895 744 aa21.33■■□□□ 1.01
SRSF1-206ENST00000583741 OR2T3Q8NH03 318 aa21.33■■□□□ 1.01
SRSF1-206ENST00000583741 RHBDD1Q8TEB9 315 aa21.33■■□□□ 1.01
SRSF1-206ENST00000583741 NDRG1Q92597 394 aaKnown RBP21.33■■□□□ 1.01
SRSF1-206ENST00000583741 SEMA4DQ92854 862 aa21.33■■□□□ 1.01
SRSF1-206ENST00000583741 ERGIC2Q96RQ1 377 aa21.33■■□□□ 1.01
SRSF1-206ENST00000583741 PCDHGB2Q9Y5G2 931 aa21.33■■□□□ 1.01
SRSF1-206ENST00000583741 URB1O60287 2271 aaKnown RBP21.33■■□□□ 1.01
SRSF1-206ENST00000583741 ITIH6Q6UXX5 1313 aa21.33■■□□□ 1
SRSF1-206ENST00000583741 FLRT2O43155 660 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 HLA-FP30511 346 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 FMO5P49326 533 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 AFF3P51826 1226 aaKnown RBP21.32■■□□□ 1
SRSF1-206ENST00000583741 RAD23BP54727 409 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 SYCP1Q15431 976 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 KIF19Q2TAC6 998 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 ARHGAP18Q8N392 663 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 CYB5D2Q8WUJ1 264 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 PLD4Q96BZ4 506 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 PCED1AQ9H1Q7 454 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 TMEM245Q9H330 911 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 CISHQ9NSE2 258 aa21.32■■□□□ 1
SRSF1-206ENST00000583741 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms