RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 DEPDC7Q96QD5 511 aa6.53□□□□□ -1.36
TVP23B-210ENST00000582288 ARID3AQ99856 593 aa6.53□□□□□ -1.36
TVP23B-210ENST00000582288 SEMA3CQ99985 751 aa6.53□□□□□ -1.36
TVP23B-210ENST00000582288 CBWD1Q9BRT8 395 aa6.53□□□□□ -1.36
TVP23B-210ENST00000582288 CIPCQ9C0C6 399 aa6.53□□□□□ -1.36
TVP23B-210ENST00000582288 RSPH9Q9H1X1 276 aaPredicted RBP6.53□□□□□ -1.36
TVP23B-210ENST00000582288 IKZF4Q9H2S9 585 aa6.53□□□□□ -1.36
TVP23B-210ENST00000582288 ASCL3Q9NQ33 180 aa6.53□□□□□ -1.36
TVP23B-210ENST00000582288 PRSS16Q9NQE7 514 aa6.53□□□□□ -1.36
TVP23B-210ENST00000582288 STARD5Q9NSY2 213 aa6.53□□□□□ -1.36
TVP23B-210ENST00000582288 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.53□□□□□ -1.36
TVP23B-210ENST00000582288 TJP2Q9UDY2 1190 aa6.53□□□□□ -1.36
TVP23B-210ENST00000582288 SUN2Q9UH99 717 aa6.53□□□□□ -1.36
TVP23B-210ENST00000582288 KIF3AQ9Y496 699 aa6.53□□□□□ -1.36
TVP23B-210ENST00000582288 TEX15Q9BXT5 2789 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 MYLKQ15746 1914 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 FRMD3A2A2Y4 597 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 GOLGA8IPA6NC78 632 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 LRRC72A6NJI9 287 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 GOLGA8JA6NMD2 632 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 SUV39H1O43463 412 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 AP1G2O75843 785 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 GCNT3O95395 438 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 WNT1P04628 370 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 ITGB2P05107 769 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 ATP5BP06576 529 aaKnown RBP6.52□□□□□ -1.37
TVP23B-210ENST00000582288 RARGP13631 454 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 TRIM21P19474 475 aaKnown RBP6.52□□□□□ -1.37
TVP23B-210ENST00000582288 GALCP54803 685 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 SNRPFP62306 86 aaKnown RBP6.52□□□□□ -1.37
TVP23B-210ENST00000582288 GABREP78334 506 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 MPPE1Q53F39 396 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 SGO2Q562F6 1265 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 ZNF776Q68DI1 518 aaPredicted RBP6.52□□□□□ -1.37
TVP23B-210ENST00000582288 LAYNQ6UX15 382 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 STXBP4Q6ZWJ1 553 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 CCDC186Q7Z3E2 898 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 UNC93AQ86WB7 457 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 AHI1Q8N157 1196 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 ZNF557Q8N988 423 aaPredicted RBP6.52□□□□□ -1.37
TVP23B-210ENST00000582288 KDM1BQ8NB78 822 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 RASSF8Q8NHQ8 419 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 BHMTQ93088 406 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 DNAJC19Q96DA6 116 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 SLC6A18Q96N87 628 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 SMOQ99835 787 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 MED10Q9BTT4 135 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 XYLT2Q9H1B5 865 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 PABPC3Q9H361 631 aaKnown RBP6.52□□□□□ -1.37
TVP23B-210ENST00000582288 USP29Q9HBJ7 922 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 KRT82Q9NSB4 513 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 OSER1Q9NX31 292 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 ANKMY1Q9P2S6 941 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 SEPT3Q9UH03 358 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 PCDHGA8Q9Y5G5 932 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 SPTA1P02549 2419 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 BSNQ9UPA5 3926 aa6.52□□□□□ -1.37
TVP23B-210ENST00000582288 GOLGA4Q13439 2230 aaKnown RBP6.52□□□□□ -1.37
TVP23B-210ENST00000582288 HHLA1C9JL84 531 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 PYCARD-AS1I3L0S3 204 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 LATO43561 262 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 RNASEH1O60930 286 aaKnown RBP6.51□□□□□ -1.37
TVP23B-210ENST00000582288 USP12O75317 370 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 MPOP05164 745 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 DLDP09622 509 aaKnown RBP6.51□□□□□ -1.37
TVP23B-210ENST00000582288 RALAP11233 206 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 CKMT1AP12532 417 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 TNNI1P19237 187 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 HLA-FP30511 346 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 CORO1AP31146 461 aaKnown RBP6.51□□□□□ -1.37
TVP23B-210ENST00000582288 CASP5P51878 434 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 AP3M2P53677 418 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 TRPC3Q13507 836 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 UBAP2LQ14157 1087 aaKnown RBP6.51□□□□□ -1.37
TVP23B-210ENST00000582288 PSMD6Q15008 389 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 SNRNP35Q16560 246 aaKnown RBP6.51□□□□□ -1.37
TVP23B-210ENST00000582288 ARL13BQ3SXY8 428 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 FNDC3BQ53EP0 1204 aaKnown RBP6.51□□□□□ -1.37
TVP23B-210ENST00000582288 HS1BP3Q53T59 392 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 C10orf120Q5SQS8 335 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 PRAMEF14Q5SWL7 426 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 MPP7Q5T2T1 576 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 KDM7AQ6ZMT4 941 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 CCDC81Q6ZN84 652 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 ADIPOR2Q86V24 386 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 CACUL1Q86Y37 369 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 CBWD2Q8IUF1 395 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 OR4C6Q8NH72 309 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 DDI1Q8WTU0 396 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 SORCS1Q8WY21 1168 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 NAF1Q96HR8 494 aaKnown RBP6.51□□□□□ -1.37
TVP23B-210ENST00000582288 VCPIP1Q96JH7 1222 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 FAM84AQ96KN4 292 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 SLC46A1Q96NT5 459 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 CGRRF1Q99675 332 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 KDM4CQ9H3R0 1056 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 PCIF1Q9H4Z3 704 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 EBF2Q9HAK2 575 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 NMUR1Q9HB89 426 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 AASDHPPTQ9NRN7 309 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms