RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PIK3R6Q5UE93 754 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 THSD4Q6ZMP0 1018 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 NT5DC3Q86UY8 548 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 BBS7Q8IWZ6 715 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 ZNF683Q8IZ20 524 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 ADGRG2Q8IZP9 1017 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 CCDC185Q8N715 623 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 IRF7Q92985 503 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 PEBP4Q96S96 227 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 SNRNP25Q9BV90 132 aaKnown RBP10.76□□□□□ -0.69
CCDC47-203ENST00000580986 PRDM16Q9HAZ2 1276 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 ANLNQ9NQW6 1124 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 SLC2A4RGQ9NR83 387 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 DUS2Q9NX74 493 aaKnown RBP10.76□□□□□ -0.69
CCDC47-203ENST00000580986 DDX56Q9NY93 547 aaKnown RBP10.76□□□□□ -0.69
CCDC47-203ENST00000580986 DONSONQ9NYP3 566 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 PPARGC1AQ9UBK2 798 aaKnown RBP10.76□□□□□ -0.69
CCDC47-203ENST00000580986 AP4E1Q9UPM8 1137 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 COL4A3Q01955 1670 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 SYNJ2BP-COX16A0A087WUM0 186 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 TYW5A2RUC4 315 aaKnown RBP10.75□□□□□ -0.69
CCDC47-203ENST00000580986 DRGXA6NNA5 263 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 F5H5T6 163 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 HOXC11O43248 304 aaPredicted RBP10.75□□□□□ -0.69
CCDC47-203ENST00000580986 KIF5CO60282 957 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 ADH1CP00326 375 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 PENKP01210 267 aaPredicted RBP10.75□□□□□ -0.69
CCDC47-203ENST00000580986 HMBSP08397 361 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 RARAP10276 462 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 SRFP11831 508 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 GLULP15104 373 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 EIF2DP41214 584 aaKnown RBP10.75□□□□□ -0.69
CCDC47-203ENST00000580986 PFKPQ01813 784 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 TDGQ13569 410 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 PDK2Q15119 407 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 MPPE1Q53F39 396 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 RAB6CQ53S08 254 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 TJAP1Q5JTD0 557 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 ARTNQ5T4W7 220 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 NADSYN1Q6IA69 706 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 SCYL2Q6P3W7 929 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 C1orf228Q6PIY5 440 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 CHST9Q7L1S5 443 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 PEX26Q7Z412 305 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 MAP7D3Q8IWC1 876 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 YAF2Q8IY57 180 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 KATNAL2Q8IYT4 538 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 SLC44A3Q8N4M1 653 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 CPA6Q8N4T0 437 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 WNT2BQ93097 391 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 WBP2Q969T9 261 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 HES6Q96HZ4 224 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 EPAS1Q99814 870 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 KXD1Q9BQD3 176 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 ZNF670Q9BS34 389 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 PLA2G2FQ9BZM2 168 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 RAB6CQ9H0N0 254 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 SPHK2Q9NRA0 654 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 COX16Q9P0S2 106 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 OR12D3Q9UGF7 316 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 AMFRQ9UKV5 643 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 DUSP12Q9UNI6 340 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 JRKLQ9Y4A0 524 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 PCDHA3Q9Y5H8 950 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 HS3ST4Q9Y661 456 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 DOCK4Q8N1I0 1966 aa10.75□□□□□ -0.69
CCDC47-203ENST00000580986 A0A1B0GVM2 712 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 TCAF2A6NFQ2 919 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 WASH4PA8MWX3 477 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 FGF10O15520 208 aaPredicted RBP10.74□□□□□ -0.69
CCDC47-203ENST00000580986 MOCS2O96007 188 aaPredicted RBP10.74□□□□□ -0.69
CCDC47-203ENST00000580986 TUBB4AP04350 444 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 CYBBP04839 570 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 TCF4P15884 667 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 TACR2P21452 398 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 ARSEP51690 589 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 TAS2R40P59535 323 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 COPS2P61201 443 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 NR1H3Q13133 447 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 RUNX3Q13761 415 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 AUHQ13825 339 aaKnown RBP10.74□□□□□ -0.69
CCDC47-203ENST00000580986 TAZQ16635 292 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 RABGAP1LQ5R372 815 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 MEI1Q5TIA1 1274 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 FYB2Q5VWT5 728 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 LRRC31Q6UY01 552 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 CHSY1Q86X52 802 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 HJURPQ8NCD3 748 aaPredicted RBP10.74□□□□□ -0.69
CCDC47-203ENST00000580986 EXD1Q8NHP7 514 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 TSC1Q92574 1164 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 ZDHHC16Q969W1 377 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 FAF2Q96CS3 445 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 ASIC4Q96FT7 647 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 RPP25Q9BUL9 199 aaKnown RBP10.74□□□□□ -0.69
CCDC47-203ENST00000580986 SLC2A11Q9BYW1 496 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 ZWILCHQ9H900 591 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 HPS4Q9NQG7 708 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.74□□□□□ -0.69
CCDC47-203ENST00000580986 LIMD1Q9UGP4 676 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 PCSK1NQ9UHG2 260 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms